RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 LPAR3Q9UBY5 353 aa6.6□□□□□ -1.35
COPS3-205ENST00000463097 MBD1Q9UIS9 605 aaPredicted RBP6.6□□□□□ -1.35
COPS3-205ENST00000463097 CA14Q9ULX7 337 aa6.6□□□□□ -1.35
COPS3-205ENST00000463097 PNPLA7Q6ZV29 1317 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 H7C4K7 107 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 CCP110O43303 1012 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 DNPH1O43598 174 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 COQ9O75208 318 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 ACTR2P61160 394 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 ADAM8P78325 824 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 SETQ01105 290 aaPredicted RBP6.59□□□□□ -1.35
COPS3-205ENST00000463097 NSUN2Q08J23 767 aaKnown RBP eCLIP6.59□□□□□ -1.35
COPS3-205ENST00000463097 MRPL49Q13405 166 aaKnown RBP6.59□□□□□ -1.35
COPS3-205ENST00000463097 SURF1Q15526 300 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 INSCQ1MX18 579 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 ATPAF1Q5TC12 328 aaPredicted RBP6.59□□□□□ -1.35
COPS3-205ENST00000463097 FAXCQ5TGI0 409 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 SPATA1Q5VX52 437 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 MRNIPQ6NTE8 343 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 USP30Q70CQ3 517 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 TSPYL6Q8N831 410 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 OR6Y1Q8NGX8 325 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 SMCR8Q8TEV9 937 aaPredicted RBP6.59□□□□□ -1.35
COPS3-205ENST00000463097 CENPIQ92674 756 aaPredicted RBP6.59□□□□□ -1.35
COPS3-205ENST00000463097 HVCN1Q96D96 273 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 COG8Q96MW5 612 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 BARD1Q99728 777 aaKnown RBP6.59□□□□□ -1.35
COPS3-205ENST00000463097 ZBTB26Q9HCK0 441 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 FBXO34Q9NWN3 711 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 FAM30AQ9NZY2 134 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 DKK4Q9UBT3 224 aa6.59□□□□□ -1.35
COPS3-205ENST00000463097 CCDC196A0A1B0GTZ2 297 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 ANKRD18BA2A2Z9 1011 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 PEX10O60683 326 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 GFPT2O94808 682 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 AGFG2O95081 481 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 KIF20AO95235 890 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 NTSR2O95665 410 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 POMCP01189 267 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 TK1P04183 234 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 PRKCBP05771 671 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 FDXRP22570 491 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 VIPR2P41587 438 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 CCR5P51681 352 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 SEC24CP53992 1094 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 BCAT1P54687 386 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 ALDH18A1P54886 795 aaKnown RBP6.58□□□□□ -1.36
COPS3-205ENST00000463097 NPEPPSP55786 919 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 CLRN1P58418 232 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 RAP2BP61225 183 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 NUCB1Q02818 461 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 SCAPQ12770 1279 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 SLC12A1Q13621 1099 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 USP10Q14694 798 aaKnown RBP6.58□□□□□ -1.36
COPS3-205ENST00000463097 UBXN2BQ14CS0 331 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 PLA1AQ53H76 456 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 AGAP9Q5VTM2 703 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 ITPRIPL1Q6GPH6 555 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 SPOCD1Q6ZMY3 1216 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 FASTKD5Q7L8L6 764 aaKnown RBP6.58□□□□□ -1.36
COPS3-205ENST00000463097 GAS2L3Q86XJ1 694 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 TMIEQ8NEW7 156 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 OR14K1Q8NGZ2 314 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 FNIP1Q8TF40 1166 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 RSC1A1Q92681 617 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 SERINC2Q96SA4 455 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 GPHA2Q96T91 129 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 MESP1Q9BRJ9 268 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 CHCHD6Q9BRQ6 235 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 PREBQ9HCU5 417 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 OLA1Q9NTK5 396 aaKnown RBP6.58□□□□□ -1.36
COPS3-205ENST00000463097 AASSQ9UDR5 926 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 STK17AQ9UEE5 414 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 ATP11BQ9Y2G3 1177 aa6.58□□□□□ -1.36
COPS3-205ENST00000463097 H0Y3Z8 333 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 CCER2I3L3R5 266 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 FURINP09958 794 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 ZNF888P0CJ79 500 aaPredicted RBP6.57□□□□□ -1.36
COPS3-205ENST00000463097 RXRAP19793 462 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 LIMS1P48059 325 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 PTDSS1P48651 473 aaKnown RBP6.57□□□□□ -1.36
COPS3-205ENST00000463097 POU5F1Q01860 360 aaKnown RBP6.57□□□□□ -1.36
COPS3-205ENST00000463097 HGFACQ04756 655 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 CHRNDQ07001 517 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 TCF15Q12870 199 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 KCNMB1Q16558 191 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 SLC45A4Q5BKX6 768 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 ZMAT1Q5H9K5 638 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 NEK10Q6ZWH5 1172 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 BRINP3Q76B58 766 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 PPP1R32Q7Z5V6 425 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 ATG4DQ86TL0 474 aaPredicted RBP6.57□□□□□ -1.36
COPS3-205ENST00000463097 CSGALNACT1Q8TDX6 532 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 UCMAQ8WVF2 138 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 RFFLQ8WZ73 363 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 MOGAT1Q96PD6 335 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 TRAPPC9Q96Q05 1148 aa6.57□□□□□ -1.36
COPS3-205ENST00000463097 IMPG2Q9BZV3 1241 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms