RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 INVSQ9Y283 1065 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 DENND4CQ5VZ89 1909 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 KIAA1549LQ6ZVL6 1849 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 C1QTNF9BB2RNN3 333 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 CYB561D2O14569 222 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 C1QTNF9P0C862 333 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 ZNF131P52739 623 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 GRIN1Q05586 938 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 GRSF1Q12849 480 aaKnown RBP eCLIP16.94■□□□□ 0.3
SND1-203ENST00000463020 VEPH1Q14D04 833 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 RPLP0P6Q8NHW5 317 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 DDX1Q92499 740 aaKnown RBP16.94■□□□□ 0.3
SND1-203ENST00000463020 THG1LQ9NWX6 298 aaKnown RBP16.94■□□□□ 0.3
SND1-203ENST00000463020 MYO16Q9Y6X6 1858 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 DMXL2Q8TDJ6 3036 aa16.94■□□□□ 0.3
SND1-203ENST00000463020 BAHCC1Q9P281 2608 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 CCDC163A0A0D9SF12 145 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 HOXB3P14651 431 aaPredicted RBP16.93■□□□□ 0.3
SND1-203ENST00000463020 GJA4P35212 333 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 TUFMP49411 452 aaKnown RBP16.93■□□□□ 0.3
SND1-203ENST00000463020 MCM6Q14566 821 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
SND1-203ENST00000463020 MYCT1Q8N699 235 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 CYP2S1Q96SQ9 504 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 TDP1Q9NUW8 608 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 LARSQ9P2J5 1176 aaKnown RBP16.93■□□□□ 0.3
SND1-203ENST00000463020 WASF3Q9UPY6 502 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 NBEAQ8NFP9 2946 aa16.93■□□□□ 0.3
SND1-203ENST00000463020 XPOTO43592 962 aaKnown RBP16.92■□□□□ 0.3
SND1-203ENST00000463020 FOXD2O60548 495 aaPredicted RBP16.92■□□□□ 0.3
SND1-203ENST00000463020 AVPR1AP37288 418 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 DDR2Q16832 855 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 RNF43Q68DV7 783 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 TTC16Q8NEE8 873 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 GCNAQ96QF7 691 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 EDEM2Q9BV94 578 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 DPP3Q9NY33 737 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 KCND2Q9NZV8 630 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 MAGED2Q9UNF1 606 aaPredicted RBP16.92■□□□□ 0.3
SND1-203ENST00000463020 WNT6Q9Y6F9 365 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 FREM2Q5SZK8 3169 aa16.92■□□□□ 0.3
SND1-203ENST00000463020 DSPP15924 2871 aaKnown RBP16.91■□□□□ 0.3
SND1-203ENST00000463020 LAMA5O15230 3695 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 C4orf47A7E2U8 309 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 PATE3B3GLJ2 98 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 AKAP3O75969 853 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 ACAT1P24752 427 aaKnown RBP16.91■□□□□ 0.3
SND1-203ENST00000463020 ADSSP30520 456 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 BFSP1Q12934 665 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 ZNF77Q15935 545 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 MON1AQ86VX9 555 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 OSTM1Q86WC4 334 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 SFTPA1Q8IWL2 248 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 SPPL2BQ8TCT7 592 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 P2RY13Q9BPV8 354 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 TMEM121BQ9BXQ6 578 aaPredicted RBP16.91■□□□□ 0.3
SND1-203ENST00000463020 VPS45Q9NRW7 570 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 ODF2LQ9ULJ1 636 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 DERAQ9Y315 318 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 PCDHGA5Q9Y5G8 931 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 FAM208BQ5VWN6 2430 aa16.91■□□□□ 0.3
SND1-203ENST00000463020 ATRXP46100 2492 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 LNP1A1A4G5 178 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 TRAK2O60296 914 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 PROS1P07225 676 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 PLCG1P19174 1290 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 BCKDHBP21953 392 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 CYP2F1P24903 491 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 TAF6P49848 677 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 ZXDBP98169 803 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 GTF2BQ00403 316 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 CREB5Q02930 508 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 KCNA1Q09470 495 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 DMC1Q14565 340 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 MTF1Q14872 753 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 TAF12Q16514 161 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 KYAT1Q16773 422 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 CD302Q8IX05 232 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 TSPAN18Q96SJ8 248 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 TPSD1Q9BZJ3 242 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 CCSER1Q9C0I3 900 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 LINC00597Q9H2U6 94 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 ECT2Q9H8V3 914 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 PARVGQ9HBI0 331 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 L1RE1Q9UN81 338 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 C2CD2Q9Y426 696 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 STYXL1Q9Y6J8 313 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 ITPR1Q14643 2758 aa16.9■□□□□ 0.3
SND1-203ENST00000463020 PKD1L2Q7Z442 2459 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 BCLAF3A2AJT9 711 aaKnown RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 C2orf78A6NCI8 922 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 KPNA7A9QM74 516 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 H0YCG3 227 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms