RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PARP1P09874 1014 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PLS3P13797 630 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PRKCAP17252 672 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SYT1P21579 422 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 RRM1P23921 792 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 GRK2P25098 689 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 KIF5BP33176 963 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 NF2P35240 595 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ECI1P42126 302 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SCAND1P57086 179 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PHC1P78364 1004 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 HMGN5P82970 282 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 TNFAIP2Q03169 654 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 KLRC3Q07444 240 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PPFIA1Q13136 1202 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SNX17Q15036 470 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ACAP2Q15057 778 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PPP2R5BQ15173 497 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 TERF2Q15554 542 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 CLUL1Q15846 466 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PKN1Q16512 942 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ARHGAP44Q17R89 818 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 KIAA0753Q2KHM9 967 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ASPRV1Q53RT3 343 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 FAM133BQ5BKY9 247 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 HLA-DQA1Q5Y7H0 255 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SLFN13Q68D06 897 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 MBLAC2Q68D91 279 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 DENND5AQ6IQ26 1287 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 CC2D1AQ6P1N0 951 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 DARS2Q6PI48 645 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 CYP2R1Q6VVX0 501 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 KCTD1Q719H9 257 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PTRH1Q86Y79 214 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 MIER2Q8N344 545 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 OR2C3Q8N628 320 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 KREMEN2Q8NCW0 462 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 GMCL1P1Q8NEA9 526 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 FRS2Q8WU20 508 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 LMBR1Q8WVP7 490 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 TBCBQ99426 244 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 EIF2AK1Q9BQI3 630 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SPZ1Q9BXG8 430 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SLC26A6Q9BXS9 759 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 RNF26Q9BY78 433 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 GTPBP4Q9BZE4 634 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 KIAA1683Q9H0B3 1180 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 RIOX1Q9H6W3 641 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 VCPKMTQ9H867 229 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 GJB4Q9NTQ9 266 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 OXSMQ9NWU1 459 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ORC3Q9UBD5 711 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 SYNPO2Q9UMS6 1093 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 NPFFR2Q9Y5X5 522 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ITIH6Q6UXX5 1313 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PASKQ96RG2 1323 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 NPHP3-ACAD11A0A0J9YXS1 232 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CCDC196A0A1B0GTZ2 297 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 LRRC10BA6NIK2 292 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 M0R3H8 397 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 STX6O43752 255 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CDKL5O76039 1030 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CELF2O95319 508 aaKnown RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 DEXIO95424 95 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 MYBP10242 640 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CALRP27797 417 aaKnown RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 SLC16A2P36021 539 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 SLC1A4P43007 532 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 GUCY1B3Q02153 619 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 MVKQ03426 396 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 SPP2Q13103 211 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 LAPTM5Q13571 262 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 LLGL1Q15334 1064 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 TESK1Q15569 626 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 MLANAQ16655 118 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 GPATCH4Q5T3I0 446 aaKnown RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CST9Q5W186 159 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 OTUD7BQ6GQQ9 843 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 GALNT18Q6P9A2 607 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CPLX2Q6PUV4 134 aaKnown RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 C16orf54Q6UWD8 224 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 RINLQ6ZS11 566 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 OVCH1Q7RTY7 1134 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 ARMC9Q7Z3E5 817 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 KIAA0319LQ8IZA0 1049 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 ADGRF4Q8IZF3 695 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 FAM184AQ8NB25 1140 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 NUP43Q8NFH3 380 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 PCDH19Q8TAB3 1148 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 PIBF1Q8WXW3 757 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 JADE3Q92613 823 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 C1GALT1C1Q96EU7 318 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 TMEM169Q96HH4 297 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 C12orf42Q96LP6 360 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 RIPOR3Q96MK2 946 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 PIGSQ96S52 555 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 DIRC2Q96SL1 478 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 ALG1Q9BT22 464 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 PHF20Q9BVI0 1012 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 SH2D4AQ9H788 454 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms