RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 VPS52Q8N1B4 723 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DTX3LQ8TDB6 740 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DCAKDQ8WVC6 231 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GATA6Q92908 595 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TRAPPC9Q96Q05 1148 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KLF6Q99612 283 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FAM213AQ9BRX8 229 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KMT5AQ9NQR1 393 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PARVAQ9NVD7 372 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 hCG_1818297A0A087WSY0 165 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SGK1O00141 431 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 NDC80O14777 642 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TGDSO95455 350 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KCNA3P22001 575 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 WDR44Q5JSH3 913 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FNBP1LQ5T0N5 605 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ANKRD22Q5VYY1 191 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SPOPLQ6IQ16 392 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KBTBD2Q8IY47 623 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PYROXD1Q8WU10 500 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PHACTR1Q9C0D0 580 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TDRD3Q9H7E2 651 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KRT82Q9NSB4 513 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MTO1Q9Y2Z2 717 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 UBIAD1Q9Y5Z9 338 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZNF646O15015 1829 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 HLA-DRAP01903 254 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DHRS4L1P0CG22 281 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 RARBP10826 455 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GNA15P30679 374 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PTPN7P35236 360 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 CLDN10P78369 228 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KLHL38Q2WGJ6 581 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZACNQ401N2 412 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 BRDTQ58F21 947 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 C3orf62Q6ZUJ4 267 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TTC7BQ86TV6 843 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 CHSY1Q86X52 802 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 STMN2Q93045 179 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 NTPCRQ9BSD7 190 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ARHGEF4Q9NR80 690 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FBXO28Q9NVF7 368 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TMEM191CA6NGB0 347 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 HNRNPDLO14979 420 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ENTPD3O75355 529 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 TMEM191BP0C7N4 346 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ESRRAP11474 423 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ETV4P43268 484 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 CACNA2D1P54289 1103 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 SOX10P56693 466 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 PSMC5P62195 406 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ZBTB16Q05516 673 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 PRKD1Q15139 912 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 TDRD10Q5VZ19 366 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 TXNRD3NBQ6F5E7 133 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 PPFIBP2Q8ND30 876 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 SLC35B2Q8TB61 432 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 CPT1BQ92523 772 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ZNF184Q99676 751 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 MAGEA13PA6NCF6 341 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 C2orf71A6NGG8 1288 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 F8VP50 259 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 SMAPO00193 183 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 RTN3O95197 1032 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 GARTP22102 1010 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 CDKN2BP42772 138 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 ARL4CP56559 192 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 WNT7BP56706 349 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 PLCB3Q01970 1234 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 MTMR1Q13613 665 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 CUL2Q13617 745 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 TFDP3Q5H9I0 405 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 STRIP1Q5VSL9 837 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 FAM91A1Q658Y4 838 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 PCGF5Q86SE9 256 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 RHPN2Q8IUC4 686 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 PPIL6Q8IXY8 311 aa12.08□□□□□ -0.48
CDK5RAP1-207ENST00000461710 NAT8LQ8N9F0 302 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms