RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ADAMTS1Q9UHI8 967 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 CD207Q9UJ71 328 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 CNTN6Q9UQ52 1028 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 PCDHGC5Q9Y5F6 944 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 C19orf67A6NJJ6 358 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 PODXLO00592 558 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 PPEF2O14830 753 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 LCA5LO95447 670 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 MAGEA1P43355 309 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 GFPT1Q06210 699 aaPredicted RBP16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 SMAD4Q13485 552 aaKnown RBP16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 RBM23Q86U06 439 aaKnown RBP16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 SLC47A2Q86VL8 602 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 UBR7Q8N806 425 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 MRPL43Q8N983 215 aaKnown RBP16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 ACRBPQ8NEB7 543 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 EPS8L1Q8TE68 723 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 TCF25Q9BQ70 676 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 C1QTNF1Q9BXJ1 281 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 SMYD3Q9H7B4 428 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 NRDE2Q9H7Z3 1164 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 TBC1D13Q9NVG8 400 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 GDAP2Q9NXN4 497 aa16.17■□□□□ 0.18
TMEM39A-203ENST00000461654 ARHGEF37A1IGU5 675 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 CASTOR2A6NHX0 329 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 PI4K2BG5E9Z4 385 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 ZNF500O60304 480 aaPredicted RBP16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 CSPG5O95196 566 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 GLP2RO95838 553 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 GALTP07902 379 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 PAEPP09466 180 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 GNA15P30679 374 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 PBX3P40426 434 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 NDUFV1P49821 464 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 CLCNKBP51801 687 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 AFF1P51825 1210 aaKnown RBP16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 LILRA4P59901 499 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 CDR2Q01850 454 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 NAB2Q15742 525 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 ASTE1Q2TB18 679 aaPredicted RBP16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 CCDC122Q5T0U0 273 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 DSTYKQ6XUX3 929 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 ADHFE1Q8IWW8 467 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 TMEM130Q8N3G9 435 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 C17orf53Q8N3J3 647 aaPredicted RBP16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 APPL2Q8NEU8 664 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 SNX25Q9H3E2 840 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 BARX2Q9UMQ3 279 aaPredicted RBP16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 PCDHA13Q9Y5I0 950 aa16.16■□□□□ 0.18
TMEM39A-203ENST00000461654 A0A087X0T9 212 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 PER2O15055 1255 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 THAP12O43422 761 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 MED7O43513 233 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 FAM163BP0C2L3 166 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 FAM228BP0C875 321 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 CDH8P55286 799 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 ZP2Q05996 745 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 TAF3Q5VWG9 929 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 ALKBH5Q6P6C2 394 aaKnown RBP16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 DCLRE1AQ6PJP8 1040 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 DDX53Q86TM3 631 aaKnown RBP16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 NOP9Q86U38 636 aaKnown RBP16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 TOP6BLQ8N6T0 577 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 SMRP1Q8NCR6 262 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 TMEM169Q96HH4 297 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 IGSF21Q96ID5 467 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 PPP1R13BQ96KQ4 1090 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 TMEM175Q9BSA9 504 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 TSGA10Q9BZW7 698 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 ENTPD7Q9NQZ7 604 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 STK39Q9UEW8 545 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 NOCTQ9UK39 431 aaKnown RBP16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 KIAA1257Q9ULG3 409 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 IRAK3Q9Y616 596 aa16.15■□□□□ 0.18
TMEM39A-203ENST00000461654 NCOR1O75376 2440 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 C2orf71A6NGG8 1288 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 HIDE1A8MVS5 230 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 CYB561D2O14569 222 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 KRT86O43790 486 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 CILPO75339 1184 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 TACC1O75410 805 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 B3GAT3O94766 335 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 ALDH2P05091 517 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 CD19P15391 556 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 VAV2P52735 878 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF132P52740 706 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 INCA1Q0VD86 236 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 SMC1AQ14683 1233 aaKnown RBP16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 UPP1Q16831 310 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF394Q53GI3 561 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 PPP1R2P3Q6NXS1 205 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 TRIM72Q6ZMU5 477 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms