RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 FCGR1AP12314 374 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF23P17027 643 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 RGS7P49802 495 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 GEMP55040 296 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 NCOA4Q13772 614 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 LAYNQ6UX15 382 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 CPA5Q8WXQ8 436 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 JADE3Q92613 823 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 C9orf72Q96LT7 481 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF512Q96ME7 567 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 KLHL25Q9H0H3 589 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.35□□□□□ -0.917e-7■□□□□ 9.9
BRCA1-205ENST00000461221 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 V9GYQ6 96 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 PRRG1O14668 218 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 GALCP54803 685 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 ALX1Q15699 326 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 JAMLQ86YT9 394 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 MMGT1Q8N4V1 131 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 EXD1Q8NHP7 514 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 OSBPL6Q9BZF3 934 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 MAGEB2O15479 319 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ECE2O60344 883 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 RFC5P40937 340 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 CCT8P50990 548 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 RSBN1Q5VWQ0 802 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 CYB5R4Q7L1T6 521 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 CCNJLQ8IV13 435 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 MOSPD2Q8NHP6 518 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 AVENQ9NQS1 362 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 KLHL20Q9Y2M5 609 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 STON1Q9Y6Q2 735 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 FAM25AB3EWG3 89 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 FAM25CB3EWG5 89 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 FAM25GB3EWG6 89 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 GPC1P35052 558 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SOX11P35716 441 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 FMO5P49326 533 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 NAB2Q15742 525 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 EDRF1Q3B7T1 1238 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 MRNIPQ6NTE8 343 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 CCNI2Q6ZMN8 369 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 NT5C1AQ9BXI3 368 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ZCWPW1Q9H0M4 648 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 MKL2Q9ULH7 1088 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 TMEM2Q9UHN6 1383 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 STX7O15400 261 aaKnown RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 IRF1P10914 325 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ATP6V1B1P15313 513 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 VCLP18206 1134 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 RXRBP28702 533 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM25Q14258 630 aaKnown RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ZCWPW2Q504Y3 356 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SYCP2LQ5T4T6 812 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 IER5Q5VY09 327 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 IKBIPQ70UQ0 350 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ATP6V0D2Q8N8Y2 350 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SPATA18Q8TC71 538 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF669Q96BR6 464 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 RNFT2Q96EX2 444 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF333Q96JL9 665 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 UBXN6Q9BZV1 441 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 EFCAB1Q9HAE3 211 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ZCCHC17Q9NP64 241 aaKnown RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 C2orf81A6NN90 581 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 KBTBD13C9JR72 458 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SLC2A3P11169 496 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 LSP1P33241 339 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 TGM3Q08188 693 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ITGA9Q13797 1035 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 UNC45BQ8IWX7 931 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 MB21D2Q8IYB1 491 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF513Q8N8E2 541 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SNRNP27Q8WVK2 155 aaKnown RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 LRRC39Q96DD0 335 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SERPINB12Q96P63 405 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 SEPT5Q99719 369 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-205ENST00000461221 ARMC7Q9H6L4 198 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 VTA1Q9NP79 307 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 RAD18Q9NS91 495 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 RNF112Q9ULX5 631 aa9.34□□□□□ -0.91
BRCA1-205ENST00000461221 F5H6K3 240 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 H7C1W4 665 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 TSC22D2O75157 780 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM253P0C7T8 217 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 SRGNP10124 158 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 CYP2C8P10632 490 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 SERPINH1P50454 418 aaKnown RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 YWHAZP63104 245 aaKnown RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 KLRC3Q07444 240 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 MMRN1Q13201 1228 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 CCDC144BQ3MJ40 725 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 SUSD4Q5VX71 490 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 ARMC3Q5W041 872 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms