RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 PDCL2Q8N4E4 241 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 FAM84AQ96KN4 292 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 C2orf42Q9NWW7 574 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 ZMYM5Q9UJ78 669 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 GMEB2Q9UKD1 530 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 RAB23Q9ULC3 237 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 L1RE1Q9UN81 338 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 AGAP1Q9UPQ3 857 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 PCDHB13Q9Y5F0 798 aa15.83■□□□□ 0.12
SMPD4-216ENST00000461187 MORC2Q9Y6X9 1032 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-216ENST00000461187 THADAQ6YHU6 1953 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 ABCA7Q8IZY2 2146 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 CHURC1-FNTBB4DL54 471 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 HRO43593 1189 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 IDEP14735 1019 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 FNTBP49356 437 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 GPR15P49685 360 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 TSPY1Q01534 308 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 ITPRIPL2Q3MIP1 535 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 LAIR1Q6GTX8 287 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 CCDC73Q6ZRK6 1079 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 MAB21L3Q8N8X9 362 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 STKLD1Q8NE28 680 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 CACTINQ8WUQ7 758 aaKnown RBP15.82■□□□□ 0.12
SMPD4-216ENST00000461187 LEO1Q8WVC0 666 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-216ENST00000461187 CBWD1Q9BRT8 395 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 PI4K2AQ9BTU6 479 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 PANK2Q9BZ23 570 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 GKN1Q9NS71 199 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 THG1LQ9NWX6 298 aaKnown RBP15.82■□□□□ 0.12
SMPD4-216ENST00000461187 RBAKQ9NYW8 714 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-216ENST00000461187 USP18Q9UMW8 372 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 CCL26Q9Y258 94 aa15.82■□□□□ 0.12
SMPD4-216ENST00000461187 GOLGA8IPA6NC78 632 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 GOLGA8JA6NMD2 632 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 PRR5-ARHGAP8B1AHC4 643 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 EXTL3O43909 919 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 HUS1O60921 280 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 PRPF40AO75400 957 aaKnown RBP15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SDHBP21912 280 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 DDX6P26196 483 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMPD4-216ENST00000461187 HOXC13P31276 330 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 STAT6P42226 847 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 ATXN1P54253 815 aaKnown RBP15.81■□□□□ 0.12
SMPD4-216ENST00000461187 ARHGAP8P85298 464 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 LMNB2Q03252 620 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SPEM2Q0P670 501 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 ALCAMQ13740 583 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SLC39A14Q15043 492 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 NFE2Q16621 373 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SDHAF4Q5VUM1 108 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 PRR23BQ6ZRT6 265 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SYCP3Q8IZU3 236 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 TMEM86AQ8N2M4 240 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SYNPOQ8N3V7 929 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 LRRC52Q8N7C0 313 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 USP13Q92995 863 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-216ENST00000461187 USP28Q96RU2 1077 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 PKMYT1Q99640 499 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 FAM83CQ9BQN1 747 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 ACBD6Q9BR61 282 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 PDE11AQ9HCR9 933 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 HPS4Q9NQG7 708 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 PANK4Q9NVE7 773 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 GDAP2Q9NXN4 497 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 DDX43Q9NXZ2 648 aaKnown RBP15.81■□□□□ 0.12
SMPD4-216ENST00000461187 SIX4Q9UIU6 781 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 ITGA11Q9UKX5 1188 aa15.81■□□□□ 0.12
SMPD4-216ENST00000461187 CACNA1BQ00975 2339 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 OTOL1A6NHN0 477 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 SOBPA7XYQ1 873 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 TULP1O00294 542 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 PRPF6O94906 941 aaKnown RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 RETP07949 1114 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 CSH1P0DML2 217 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 CSH2P0DML3 217 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 ACAT1P24752 427 aaKnown RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 CYP2F1P24903 491 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 AVPR1AP37288 418 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 BFSP1Q12934 665 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 SRSF5Q13243 272 aaKnown RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 SIM2Q14190 667 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 INTS6LQ5JSJ4 861 aaKnown RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 TXNDC8Q6A555 127 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 HEATR6Q6AI08 1181 aaKnown RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 LONP2Q86WA8 852 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 OSTM1Q86WC4 334 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 CSGALNACT2Q8N6G5 542 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 RIN3Q8TB24 985 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 CHFRQ96EP1 664 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 PCIF1Q9H4Z3 704 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 ABCB6Q9NP58 842 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 TDP1Q9NUW8 608 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 MAGED2Q9UNF1 606 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-216ENST00000461187 MTMR6Q9Y217 621 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 PI4KAP42356 2102 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 CEP192Q8TEP8 1941 aa15.8■□□□□ 0.12
SMPD4-216ENST00000461187 TADA3O75528 432 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 HOXA6P31267 233 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 CNR2P34972 360 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms