RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 GJD3Q8N144 294 aa22.02■■□□□ 1.12
RPUSD3-210ENST00000460909 NIF3L1Q9GZT8 377 aa22.02■■□□□ 1.12
RPUSD3-210ENST00000460909 DPEP3Q9H4B8 488 aa22.02■■□□□ 1.12
RPUSD3-210ENST00000460909 THAP9Q9H5L6 903 aa22.02■■□□□ 1.12
RPUSD3-210ENST00000460909 USTQ9Y2C2 406 aa22.02■■□□□ 1.12
RPUSD3-210ENST00000460909 PTPRDP23468 1912 aa22.02■■□□□ 1.11
RPUSD3-210ENST00000460909 DOCK8Q8NF50 2099 aa22.02■■□□□ 1.11
RPUSD3-210ENST00000460909 HAPLN1P10915 354 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 TUFMP49411 452 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 KCNH2Q12809 1159 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 CFAP221Q4G0U5 840 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 C11orf57Q6ZUT1 292 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 MYCBPAPQ8TBZ2 947 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 TATDN2Q93075 761 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 FAXDC2Q96IV6 333 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 LPIN3Q9BQK8 851 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 CYP3A43Q9HB55 503 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 ABCB6Q9NP58 842 aa22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 AVENQ9NQS1 362 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 ABI2Q9NYB9 513 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.01■■□□□ 1.11
RPUSD3-210ENST00000460909 A8MXQ7 604 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 C2CD4DB7Z1M9 353 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 P4HA2O15460 535 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 CLSTN1O94985 981 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 PTPN2P17706 415 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 PTPN1P18031 435 aaKnown RBP22■■□□□ 1.11
RPUSD3-210ENST00000460909 ATF6P18850 670 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 SP100P23497 879 aaPredicted RBP22■■□□□ 1.11
RPUSD3-210ENST00000460909 INCA1Q0VD86 236 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 STX1AQ16623 288 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 CCDC150Q8NCX0 1101 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 LMO3Q8TAP4 145 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 ENOX1Q8TC92 643 aaKnown RBP22■■□□□ 1.11
RPUSD3-210ENST00000460909 FUBP3Q96I24 572 aaKnown RBP eCLIP22■■□□□ 1.11
RPUSD3-210ENST00000460909 LRRC3Q9BY71 257 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 ANO10Q9NW15 660 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 NR2E1Q9Y466 385 aa22■■□□□ 1.11
RPUSD3-210ENST00000460909 AFPP02771 609 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 RHOP08100 348 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 CYP2F1P24903 491 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 ALDH1A3P47895 512 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 NDST1P52848 882 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 EPHA5P54756 1037 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 PLD1Q13393 1074 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 MAPRE1Q15691 268 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 TPD52L1Q16890 204 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 MGAT5BQ3V5L5 792 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 PABPC1LQ4VXU2 614 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 B3GALNT2Q8NCR0 500 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 MYLPFQ96A32 169 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 PCED1BQ96HM7 432 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 SEPT5Q99719 369 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 HMGXB4Q9UGU5 601 aa21.99■■□□□ 1.11
RPUSD3-210ENST00000460909 PTMSP20962 102 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 FSHRP23945 695 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 EPHB3P54753 998 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 TYRO3Q06418 890 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 SLC5A9Q2M3M2 681 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 MDH1BQ5I0G3 518 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 WDR44Q5JSH3 913 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 C4orf50Q6ZRC1 276 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 OTOP3Q7RTS5 596 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 UNC93AQ86WB7 457 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 SPATA2LQ8IUW3 424 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 HS6ST3Q8IZP7 471 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 CRYBG2Q8N1P7 616 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 WHAMMQ8TF30 809 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 PSMG2Q969U7 264 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 ZNF512Q96ME7 567 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 MYADMQ96S97 322 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 CORO1BQ9BR76 489 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 SAMSN1Q9NSI8 373 aaKnown RBP21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 ASB3Q9Y575 518 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 TRIOO75962 3097 aa21.98■■□□□ 1.11
RPUSD3-210ENST00000460909 NRG2O14511 850 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 SSTR3P32745 418 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 CCR2P41597 374 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 MAGEA11P43364 429 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 PRSS36Q5K4E3 855 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 TMC8Q8IU68 726 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 ZDHHC14Q8IZN3 488 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 ELMOD1Q8N336 334 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 ITFG1Q8TB96 612 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 TNIP3Q96KP6 325 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 TWNKQ96RR1 684 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 ARID3AQ99856 593 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 B3GNT5Q9BYG0 378 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 MAGEC2Q9UBF1 373 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 NFE2L3Q9Y4A8 694 aa21.97■■□□□ 1.11
RPUSD3-210ENST00000460909 CILPO75339 1184 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 GPR15P49685 360 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 ORC1Q13415 861 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 HSP90AA4PQ58FG1 418 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 IQCEQ6IPM2 695 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 POTEHQ6S545 545 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 PAQR9Q6ZVX9 377 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 GET4Q7L5D6 327 aaPredicted RBP21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 DNAJB7Q7Z6W7 309 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms