RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 DMAC2Q9NW81 257 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 ASB14A6NK59 587 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 TYK2P29597 1187 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 RPS6KA2Q15349 733 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 BOLA3Q53S33 107 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 KREMEN1Q96MU8 473 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 PAFAH2Q99487 392 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 BFARQ9NZS9 450 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 SNX9Q9Y5X1 595 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 H3BRJ5 948 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 HBP1O60381 514 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 ANP32DO95626 131 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 MMP14P50281 582 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 ITKQ08881 620 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 DBN1Q16643 649 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 TAF1BQ53T94 588 aaPredicted RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 CKAP2Q8WWK9 683 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 LENG9Q96B70 501 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 F5H423 210 aaPredicted RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 WNT10BO00744 389 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 CREB3O43889 395 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 AP1B1Q10567 949 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 STX3Q13277 289 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 EFCAB12Q6NXP0 572 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 SH3BP5LQ7L8J4 393 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 SLC51AQ86UW1 340 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 VSIG10LQ86VR7 867 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 CDR2LQ86X02 465 aaPredicted RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 NSL1Q96IY1 281 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 SMYD3Q9H7B4 428 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 CTNNAL1Q9UBT7 734 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 G3BP2Q9UN86 482 aaKnown RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 TRIM49D1C9J1S8 452 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 MAGEB2O15479 319 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 TBC1D12O60347 775 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 ITGB3P05106 788 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 THOC5Q13769 683 aaKnown RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 C4orf22Q6V702 233 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 LRRC6Q86X45 466 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 HPDLQ96IR7 371 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 TSC22D3Q99576 134 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 EPS15L1Q9UBC2 864 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 ENO1P06733 434 aaKnown RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 HSD17B4P51659 736 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 OVGP1Q12889 678 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 EFHC2Q5JST6 749 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 EXOC3L1Q86VI1 746 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 FAM111AQ96PZ2 611 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 TTC1Q99614 292 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 NUF2Q9BZD4 464 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 YY1AP1Q9H869 796 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 ABCF3Q9NUQ8 709 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 ZFATQ9P243 1243 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 OAZ1P54368 228 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 EPHB1P54762 984 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 SESN2P58004 480 aaPredicted RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 KDSRQ06136 332 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 QPCTQ16769 361 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 HIPK4Q8NE63 616 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 PCMTD2Q9NV79 361 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 AJAP1Q9UKB5 411 aaPredicted RBP12.61□□□□□ -0.39
CPNE6-202ENST00000460657 GRIN2DO15399 1336 aa12.61□□□□□ -0.39
CPNE6-202ENST00000460657 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 CALCAP01258 141 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 DSG3P32926 999 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 HADHBP55084 474 aaKnown RBP12.6□□□□□ -0.39
CPNE6-202ENST00000460657 MAMLD1Q13495 774 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 DNAL1Q4LDG9 190 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 ZPBP2Q6X784 338 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 YIPF3Q9GZM5 350 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 ACTL7BQ9Y614 415 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 NUP98P52948 1817 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 SIPA1L3O60292 1781 aaPredicted RBP12.6□□□□□ -0.39
CPNE6-202ENST00000460657 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
CPNE6-202ENST00000460657 ELF3P78545 371 aaPredicted RBP12.6□□□□□ -0.39
CPNE6-202ENST00000460657 ART3Q13508 389 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 GRAMD1BQ3KR37 738 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 AP1ARQ63HQ0 302 aa12.6□□□□□ -0.39
CPNE6-202ENST00000460657 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
CPNE6-202ENST00000460657 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms