RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 NPLOC4Q8TAT6 608 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 IPO4Q8TEX9 1081 aaKnown RBP14.92□□□□□ -0.02
ERCC3-205ENST00000460485 USP6NLQ92738 828 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
ERCC3-205ENST00000460485 FOXP3Q9BZS1 431 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 FAM204AQ9H8W3 233 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-205ENST00000460485 WHRNQ9P202 907 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 SIX4Q9UIU6 781 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 BARX2Q9UMQ3 279 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-205ENST00000460485 EFR3BQ9Y2G0 817 aa14.92□□□□□ -0.02
ERCC3-205ENST00000460485 TCRBV5S1A1TA0A578 114 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 AGPSO00116 658 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 TNFRSF10AO00220 468 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 PPFIA2O75334 1257 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 VTNP04004 478 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 ITGB3P05106 788 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 KRT19P08727 400 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 KRT7P08729 469 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 IQCF3P0C7M6 154 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 SMIM10L2AP0DMW4 78 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 SMIM10L2BP0DMW5 78 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 CD58P19256 250 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 PNPLA4P41247 253 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 PTGIRP43119 386 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 MARCKSL1P49006 195 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 SMAD3P84022 425 aaKnown RBP14.91□□□□□ -0.02
ERCC3-205ENST00000460485 PTPN11Q06124 597 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-205ENST00000460485 CALCOCO2Q13137 446 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 ZNF268Q14587 947 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-205ENST00000460485 MFSD10Q14728 455 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 SLC10A6Q3KNW5 377 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 WDR72Q3MJ13 1102 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 GJC2Q5T442 439 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-205ENST00000460485 EMC10Q5UCC4 262 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 DRICH1Q6PGQ1 229 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-205ENST00000460485 TMC3Q7Z5M5 1100 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 CCDC105Q8IYK2 499 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 BEST2Q8NFU1 509 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 HPDLQ96IR7 371 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 ADAMTS10Q9H324 1103 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 ST7Q9NRC1 585 aa14.91□□□□□ -0.02
ERCC3-205ENST00000460485 CDH23Q9H251 3354 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 ZSCAN5CA6NGD5 496 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 SIGLEC16A6NMB1 481 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 DAPK3O43293 454 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 RPS6KA5O75582 802 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CD4P01730 458 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 ZNF865P0CJ78 1059 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 DARSP14868 501 aaKnown RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CYP2B6P20813 491 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 BRD2P25440 801 aaKnown RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 RDXP35241 583 aaKnown RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 GABRB2P47870 512 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 PSEN2P49810 448 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CACNB2Q08289 660 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 PTK6Q13882 451 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 SIX1Q15475 284 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CNGA2Q16280 664 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CCNG2Q16589 344 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 HADHQ16836 314 aaKnown RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 ODF2Q5BJF6 829 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 TMEM63BQ5T3F8 832 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 TAF2Q6P1X5 1199 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 LEKR1Q6ZMV7 388 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CATSPER4Q7RTX7 472 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 HOOK3Q86VS8 718 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 UNC93AQ86WB7 457 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CEP120Q8N960 986 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 TSEN2Q8NCE0 465 aaKnown RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 TMEM176AQ96HP8 235 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 SNX27Q96L92 541 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 ZNF560Q96MR9 790 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 ZIM3Q96PE6 472 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 ERVK-5Q9HDB9 667 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 UBQLN1Q9UMX0 589 aaKnown RBP14.9□□□□□ -0.02
ERCC3-205ENST00000460485 SCN10AQ9Y5Y9 1956 aa14.9□□□□□ -0.02
ERCC3-205ENST00000460485 TMEM265A0A087WTH1 108 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 SRRM3A6NNA2 597 aaPredicted RBP14.89□□□□□ -0.03
ERCC3-205ENST00000460485 TJP3O95049 919 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 NUDT17P0C025 328 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 FAM163BP0C2L3 166 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 MYZAPP0CAP1 466 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 CYP2C9P11712 490 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 AKR1A1P14550 325 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 CD19P15391 556 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 CYP3A5P20815 502 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 HOXC8P31273 242 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 HSD17B3P37058 310 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 GUCY2FP51841 1108 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 CDR1P51861 262 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 RAD23BP54727 409 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 OSTNP61366 133 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 ADAM17P78536 824 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 KLF1Q13351 362 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms