RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PIP5K1CO60331 668 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 INMTO95050 263 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 NDST3O95803 873 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 A1BGP04217 495 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 KCNA2P16389 499 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 TYRP1P17643 537 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 TPH1P17752 444 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 ACVR2AP27037 513 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 GCLCP48506 637 aaPredicted RBP6.53□□□□□ -1.36
CCDC50-203ENST00000460064 PXNP49023 591 aaPredicted RBP6.53□□□□□ -1.36
CCDC50-203ENST00000460064 LILRA4P59901 499 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 OCA2Q04671 838 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 INSCQ1MX18 579 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 GDF7Q7Z4P5 450 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 MYRIPQ8NFW9 859 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 CPT1CQ8TCG5 803 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 SMCR8Q8TEV9 937 aaPredicted RBP6.53□□□□□ -1.36
CCDC50-203ENST00000460064 EDAQ92838 391 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 WWC2-AS2Q96NR7 200 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 STK33Q9BYT3 514 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 SMOC2Q9H3U7 446 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 SLC39A10Q9ULF5 831 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 NEU2Q9Y3R4 380 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 SUN1O94901 812 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 ITGALP20701 1170 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 CPT1AP50416 773 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 FPGSQ05932 587 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 BLMHQ13867 455 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 C4orf46Q504U0 113 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 ZNF585AQ6P3V2 769 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 TMEM108Q6UXF1 575 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 MYCT1Q8N699 235 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 CHST13Q8NET6 341 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 C18orf8Q96DM3 657 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 LOXL4Q96JB6 756 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 SNX27Q96L92 541 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 SCLT1Q96NL6 688 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 HEYLQ9NQ87 328 aaPredicted RBP6.52□□□□□ -1.37
CCDC50-203ENST00000460064 TM7SF3Q9NS93 570 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 RGS17Q9UGC6 210 aaPredicted RBP6.52□□□□□ -1.37
CCDC50-203ENST00000460064 TCAF1Q9Y4C2 921 aa6.52□□□□□ -1.37
CCDC50-203ENST00000460064 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 FAM234BA2RU67 622 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 GOLGA6L3A6NEY3 463 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 AHRRA9YTQ3 701 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 E7ENX8 843 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 F5H697 171 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PODXLO00592 558 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 TRIM24O15164 1050 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 CCP110O43303 1012 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 SKAP2O75563 359 aaPredicted RBP6.51□□□□□ -1.37
CCDC50-203ENST00000460064 SOAT2O75908 522 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 CSTBP04080 98 aaKnown RBP6.51□□□□□ -1.37
CCDC50-203ENST00000460064 ELANEP08246 267 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 IDEP14735 1019 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 LRPAP1P30533 357 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PTDSS1P48651 473 aaKnown RBP6.51□□□□□ -1.37
CCDC50-203ENST00000460064 ZNF134P52741 427 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 ITGA8P53708 1063 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 TAP2Q03519 686 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 RAPGEF1Q13905 1077 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 NPY5RQ15761 445 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PFKFB4Q16877 469 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PREPLQ4J6C6 727 aaPredicted RBP6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PRR16Q569H4 304 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 HSP90AB4PQ58FF6 505 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PLAG1Q6DJT9 500 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 CLNKQ7Z7G1 428 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 TMEM132CQ8N3T6 1108 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 NKAPQ8N5F7 415 aaKnown RBP6.51□□□□□ -1.37
CCDC50-203ENST00000460064 Q8NA96 180 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 GLIS1Q8NBF1 620 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 PPP2R3CQ969Q6 453 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 GDF15Q99988 308 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.51□□□□□ -1.376e-7■□□□□ 8.8
CCDC50-203ENST00000460064 DHX36Q9H2U1 1008 aaKnown RBP6.51□□□□□ -1.37
CCDC50-203ENST00000460064 AS3MTQ9HBK9 375 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 CD248Q9HCU0 757 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 ST6GALNAC2Q9UJ37 374 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 JAG2Q9Y219 1238 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 CHST2Q9Y4C5 530 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 FPGT-TNNI3KV9GXZ4 949 aa6.51□□□□□ -1.37
CCDC50-203ENST00000460064 hCG_1984214I3L0E3 225 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 RGS10O43665 173 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 RASAL1O95294 804 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 ANXA11P50995 505 aaKnown RBP6.5□□□□□ -1.37
CCDC50-203ENST00000460064 COPAP53621 1224 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 LOXL3P58215 753 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 MC2RQ01718 297 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 DYRK1AQ13627 763 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 PRKD1Q15139 912 aaPredicted RBP6.5□□□□□ -1.37
CCDC50-203ENST00000460064 ZIK1Q3SY52 487 aaPredicted RBP6.5□□□□□ -1.37
CCDC50-203ENST00000460064 ZACNQ401N2 412 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 SPDYE7PQ495Y7 208 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 CD300EQ496F6 205 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms