RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 FTHL17Q9BXU8 183 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 ISCUQ9H1K1 167 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 L2HGDHQ9H9P8 463 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 CISHQ9NSE2 258 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 TRMT13Q9NUP7 481 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 LCMT1Q9UIC8 334 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SIX4Q9UIU6 781 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 KIAA1257Q9ULG3 409 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SMIM28A0A1B0GU29 152 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 ARHGEF37A1IGU5 675 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 ZNF623O75123 536 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 MOCS3O95396 460 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 FTLP02792 175 aaPredicted RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 GHRP10912 638 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 CKBP12277 381 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 SELPP16109 830 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 TCP1P17987 556 aaKnown RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 CD58P19256 250 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 TAF6P49848 677 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 ZNF132P52740 706 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 GALCP54803 685 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 HADHBP55084 474 aaKnown RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 GPC5P78333 572 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 NHLH1Q02575 133 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 LPIN1Q14693 890 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 TCEAL1Q15170 157 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 ZBTB6Q15916 424 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 WHAMMP3Q1A5X7 153 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 CLEC16AQ2KHT3 1053 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 ZNF618Q5T7W0 954 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 LIN9Q5TKA1 542 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 ACAD10Q6JQN1 1059 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 SPRED2Q7Z698 418 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 CEP112Q8N8E3 955 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 SMG8Q8ND04 991 aaKnown RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 RSPH1Q8WYR4 309 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 WNT8BQ93098 351 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 VCPIP1Q96JH7 1222 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 ZNF518BQ9C0D4 1074 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 MIS12Q9H081 205 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 UVRAGQ9P2Y5 699 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 PUF60Q9UHX1 559 aaKnown RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 CDC23Q9UJX2 597 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 GTF3C4Q9UKN8 822 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 PADI3Q9ULW8 664 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 HES2Q9Y543 173 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 PCDHGC5Q9Y5F6 944 aa9.51□□□□□ -0.89
VPS50-207ENST00000458530 COL4A4P53420 1690 aaPredicted RBP9.51□□□□□ -0.89
VPS50-207ENST00000458530 A0A0U1RQJ8 604 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 TMCO5BA8MYB1 307 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 KIF4AO95239 1232 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 CALB1P05937 261 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 THP07101 528 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 MMEP08473 750 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 FAM163BP0C2L3 166 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 CHRNB2P17787 502 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 AKAP5P24588 427 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 LRPAP1P30533 357 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 CD52P31358 61 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 RFC2P35250 354 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 SNX16P57768 344 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 CENPCQ03188 943 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 INCA1Q0VD86 236 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 DSC3Q14574 896 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 LEXMQ3ZCV2 418 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 C9orf57Q5W0N0 161 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 LRRC8DQ7L1W4 858 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 MRPL10Q7Z7H8 261 aaKnown RBP9.5□□□□□ -0.89
VPS50-207ENST00000458530 HERC6Q8IVU3 1022 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 TMEM35BQ8NCS4 154 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 ATRIPQ8WXE1 791 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 DDX1Q92499 740 aaKnown RBP9.5□□□□□ -0.89
VPS50-207ENST00000458530 APBB2Q92870 758 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 ZNF653Q96CK0 615 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 FAM84AQ96KN4 292 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 UROC1Q96N76 676 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 MMS19Q96T76 1030 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 NT5C1AQ9BXI3 368 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 IRX2Q9BZI1 471 aaPredicted RBP9.5□□□□□ -0.89
VPS50-207ENST00000458530 RSAD1Q9HA92 442 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
VPS50-207ENST00000458530 BARX2Q9UMQ3 279 aaPredicted RBP9.5□□□□□ -0.89
VPS50-207ENST00000458530 PCDHGC3Q9UN70 934 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 HYOU1Q9Y4L1 999 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 MRFAP1Q9Y605 127 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 SAR1BQ9Y6B6 198 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 CAPN6Q9Y6Q1 641 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 SCINQ9Y6U3 715 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 TET1Q8NFU7 2136 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 CACNA1HO95180 2353 aa9.5□□□□□ -0.89
VPS50-207ENST00000458530 WDFY4Q6ZS81 3184 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 PTPRSQ13332 1948 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 A0A0U1RQF3 1178 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 ZBBXA8MT70 800 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 MEFVO15553 781 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms