RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 HAUS1Q96CS2 278 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 NAF1Q96HR8 494 aaKnown RBP3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 APOPT1Q96IL0 206 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ANKRD36BP1Q96IX9 119 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 RMDN2Q96LZ7 410 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 TAAR1Q96RJ0 339 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 NUDCD1Q96RS6 583 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 PAFAH2Q99487 392 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 FERMT1Q9BQL6 677 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 SIKE1Q9BRV8 207 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 TCHPQ9BT92 498 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 PI4K2AQ9BTU6 479 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 KIFC3Q9BVG8 833 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 TSSK1BQ9BXA7 367 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 MRPL4Q9BYD3 311 aaKnown RBP3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 NIF3L1Q9GZT8 377 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 KIAA1683Q9H0B3 1180 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 C2orf40Q9H1Z8 148 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 VPS11Q9H270 941 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 VCX3BQ9H321 246 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 MMADHCQ9H3L0 296 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 FAM96AQ9H5X1 160 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ACSS3Q9H6R3 686 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 TMEM134Q9H6X4 195 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 DCLRE1BQ9H816 532 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ACAD9Q9H845 621 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 MANSC1Q9H8J5 431 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 IFT122Q9HBG6 1241 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 NPHS2Q9NP85 383 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ACP6Q9NPH0 428 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF302Q9NR11 478 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 PICK1Q9NRD5 415 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 FBXO28Q9NVF7 368 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ASNSD1Q9NWL6 643 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 SLC5A4Q9NY91 659 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZFATQ9P243 1243 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 SCOCQ9UIL1 159 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 PNMA3Q9UL41 463 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 DNPEPQ9ULA0 475 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 CORO1CQ9ULV4 474 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 L3MBTL1Q9Y468 752 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 PCDHAC2Q9Y5I4 1007 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 STYXL1Q9Y6J8 313 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 SCN9AQ15858 1988 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 SSC5DA1L4H1 1573 aa3.5□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF646O15015 1829 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNFX1Q9P2E3 1918 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 A0A0G2JND7 137 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 TMEM150BA6NC51 233 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 A8MXQ7 604 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 SPECC1L-ADORA2AF8WAN1 911 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 GOLGA8SH3BPF8 625 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 H7C0C1 242 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 APOC4-APOC2K7ER74 178 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 PPP1R12AO14974 1030 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 PLSCR1O15162 318 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CHADO15335 359 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 NVLO15381 856 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 GYG2O15488 501 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CST8O60676 142 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 DNAJC6O75061 913 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 KRT38O76015 456 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 TOMM70O94826 608 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 IL18RAPO95256 599 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CCNE2O96020 404 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 IL1BP01584 269 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 APOC2P02655 101 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 WEE2P0C1S8 567 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ESRRAP11474 423 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CETPP11597 493 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 KRT3P12035 628 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CD19P15391 556 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CREB1P16220 341 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 KRT4P19013 534 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ACO1P21399 889 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 GLRA2P23416 452 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 EIF4BP23588 611 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CNTFP26441 200 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 STIP1P31948 543 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 DSG3P32926 999 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 RPA3P35244 121 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CDKN2BP42772 138 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ATP5OP48047 213 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ACOT2P49753 483 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 SERPINB9P50453 376 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF132P52740 706 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 WDR4P57081 412 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 NLRP11P59045 1033 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 EIF3EP60228 445 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ACTR2P61160 394 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 TGFB2P61812 414 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 PSMC1P62191 440 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 DYNLT1P63172 113 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 IRX4P78413 519 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 JAG1P78504 1218 aa3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 BASP1P80723 227 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 SARNPP82979 210 aaKnown RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF200P98182 395 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P18-201ENST00000457642 CDK16Q00536 496 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms