RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 KIAA1841Q6NSI8 718 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 PRSS55Q6UWB4 352 aaPredicted RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 ZNF571Q7Z3V5 609 aaPredicted RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 C12orf29Q8N999 325 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC20A1Q8WUM9 679 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 ZNF606Q8WXB4 792 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 TMEM209Q96SK2 561 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 CHP1Q99653 195 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 BAG1Q99933 345 aaPredicted RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 ZCWPW1Q9H0M4 648 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 ALG13Q9NP73 1137 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 MTUS1Q9ULD2 1270 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 MYBPHLA2RUH7 354 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 H3BNC9 293 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 O00370 1275 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 THAP12O43422 761 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 PLEKP08567 350 aaPredicted RBP17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 CD19P15391 556 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 BRD2P25440 801 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 ANXA13P27216 316 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 CDR2Q01850 454 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 STILQ15468 1287 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 PTPN14Q15678 1187 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 SGO2Q562F6 1265 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 TDRD12Q587J7 1177 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC8B1Q6J4K2 584 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 RSPO2Q6UXX9 243 aaPredicted RBP17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 CYP26C1Q6V0L0 522 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 TMTC1Q8IUR5 882 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 CCDC112Q8NEF3 446 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 FBXO22Q8NEZ5 403 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 MYCBPAPQ8TBZ2 947 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 POF1BQ8WVV4 589 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 TIFAQ96CG3 184 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 AGPAT1Q99943 283 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 PCDHGC3Q9UN70 934 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 SSX2IPQ9Y2D8 614 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 IRAK3Q9Y616 596 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 TRIOBPQ9H2D6 2365 aa17.63■□□□□ 0.41
CCDC90B-202ENST00000455220 MED7O43513 233 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CHRNB2P17787 502 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 DNAJB1P25685 340 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 FMO1Q01740 532 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 MAPRE1Q15691 268 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CNGA2Q16280 664 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CCDC142Q17RM4 750 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 ASTE1Q2TB18 679 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 MDH1BQ5I0G3 518 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 LCLAT1Q6UWP7 414 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 LRRTM3Q86VH5 581 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 LPIN3Q9BQK8 851 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 MRPL17Q9NRX2 175 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 FNIP2Q9P278 1114 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 COLQQ9Y215 455 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 FSCN2O14926 492 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 GRM6O15303 877 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 MMEP08473 750 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 EIF4A3P38919 411 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CCZ1BP86790 482 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CCZ1P86791 482 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CREMQ03060 361 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CAMK1Q14012 370 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 PPP1R26Q5T8A7 1209 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 DCP1BQ8IZD4 617 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 FUKQ8N0W3 1084 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CYFIP2Q96F07 1278 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 PCED1BQ96HM7 432 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 HNRNPABQ99729 332 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 CLSTN3Q9BQT9 956 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 NHEJ1Q9H9Q4 299 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 TLR9Q9NR96 1032 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 FAM49BQ9NUQ9 324 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 TMLHEQ9NVH6 421 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 GTF3C4Q9UKN8 822 aa17.62■□□□□ 0.41
CCDC90B-202ENST00000455220 PTPRDP23468 1912 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 CDH23Q9H251 3354 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 C2CD2LO14523 706 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 CCDC130P13994 396 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 ERVFC1P60507 584 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 GPR17Q13304 367 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 GPM6BQ13491 265 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 BMS1Q14692 1282 aaKnown RBP17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 PRPF38BQ5VTL8 546 aaKnown RBP17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 TAF3Q5VWG9 929 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 PAQR9Q6ZVX9 377 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 CCDC170Q8IYT3 715 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC30A5Q8TAD4 765 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC2A14Q8TDB8 520 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 AUTS2Q8WXX7 1259 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 MYLPFQ96A32 169 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 TCF25Q9BQ70 676 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 KCNF1Q9H3M0 494 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 TSPAN16Q9UKR8 245 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 CDY1Q9Y6F8 540 aa17.61■□□□□ 0.41
CCDC90B-202ENST00000455220 SOWAHDA6NJG2 315 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 ADAM12O43184 909 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms