RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SOWAHAQ2M3V2 549 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 TXNDC8Q6A555 127 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 TRIM68Q6AZZ1 485 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 CCDC73Q6ZRK6 1079 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 EPM2AIP1Q7L775 607 aaPredicted RBP17.27■□□□□ 0.36
GPC1-206ENST00000455111 ERMP1Q7Z2K6 904 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 METTL23Q86XA0 190 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 CBWD2Q8IUF1 395 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 FAM200AQ8TCP9 573 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 BPIFB1Q8TDL5 484 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 C2orf15Q8WU43 125 aaKnown RBP17.27■□□□□ 0.36
GPC1-206ENST00000455111 ATRIPQ8WXE1 791 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 SLC22A12Q96S37 553 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 GDAP2Q9NXN4 497 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 DDX43Q9NXZ2 648 aaKnown RBP17.27■□□□□ 0.36
GPC1-206ENST00000455111 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.36
GPC1-206ENST00000455111 GTF3C4Q9UKN8 822 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 ATG2BQ96BY7 2078 aa17.27■□□□□ 0.35
GPC1-206ENST00000455111 TGFB1I1O43294 461 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 HRO43593 1189 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 ATP2C2O75185 946 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 EHHADHQ08426 723 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 LPAL2Q16609 132 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 ARHGAP29Q52LW3 1261 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 INTS6LQ5JSJ4 861 aaKnown RBP17.26■□□□□ 0.35
GPC1-206ENST00000455111 CMTM8Q8IZV2 173 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 THEM5Q8N1Q8 247 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 MAB21L3Q8N8X9 362 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 CSGALNACT1Q8TDX6 532 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 LEO1Q8WVC0 666 aaPredicted RBP17.26■□□□□ 0.35
GPC1-206ENST00000455111 ZNF560Q96MR9 790 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 FBRSL1Q9HCM7 1045 aaKnown RBP17.26■□□□□ 0.35
GPC1-206ENST00000455111 POLR3BQ9NW08 1133 aaPredicted RBP17.26■□□□□ 0.35
GPC1-206ENST00000455111 PCDHB5Q9Y5E4 795 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 PCDHB13Q9Y5F0 798 aa17.26■□□□□ 0.35
GPC1-206ENST00000455111 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 CHURC1-FNTBB4DL54 471 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
GPC1-206ENST00000455111 NOL4O94818 638 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 LMO2P25791 158 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 CDC25CP30307 473 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 FNTBP49356 437 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 BFSP1Q12934 665 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 RSPO4Q2I0M5 234 aaPredicted RBP17.25■□□□□ 0.35
GPC1-206ENST00000455111 RALGPS2Q86X27 583 aaPredicted RBP17.25■□□□□ 0.35
GPC1-206ENST00000455111 YAF2Q8IY57 180 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 GPD1LQ8N335 351 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 CSGALNACT2Q8N6G5 542 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 EZH1Q92800 747 aaPredicted RBP17.25■□□□□ 0.35
GPC1-206ENST00000455111 HINFPQ9BQA5 517 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 ACBD6Q9BR61 282 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 C8orf33Q9H7E9 229 aaPredicted RBP17.25■□□□□ 0.35
GPC1-206ENST00000455111 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 GKN1Q9NS71 199 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 INTS13Q9NVM9 706 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 EXOC7Q9UPT5 735 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 SNX9Q9Y5X1 595 aa17.25■□□□□ 0.35
GPC1-206ENST00000455111 ANTXRLA6NF34 631 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 PRPF40AO75400 957 aaKnown RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 PAPSS2O95340 614 aaPredicted RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 FGF19O95750 216 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 LDHAP00338 332 aaKnown RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 ARSAP15289 507 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 TXLNAP40222 546 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 PNPLA4P41247 253 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 CXCL12P48061 93 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 CCR3P51677 355 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 KPNA1P52294 538 aaPredicted RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 ZXDBP98169 803 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 FOXK2Q01167 660 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 SMARCB1Q12824 385 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 VEPH1Q14D04 833 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 ARHGAP15Q53QZ3 475 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 FSTL4Q6MZW2 842 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 FAM171BQ6P995 826 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 DCP1BQ8IZD4 617 aaKnown RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 SPEM1Q8N4L4 309 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 MSANTD3Q96H12 275 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 CYP2S1Q96SQ9 504 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 IER2Q9BTL4 223 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 FAM126AQ9BYI3 521 aaPredicted RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 ZSCAN16Q9H4T2 348 aaPredicted RBP17.24■□□□□ 0.35
GPC1-206ENST00000455111 NCDNQ9UBB6 729 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 ITGA11Q9UKX5 1188 aa17.24■□□□□ 0.35
GPC1-206ENST00000455111 SPTLC2O15270 562 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 CST3P01034 146 aaPredicted RBP17.23■□□□□ 0.35
GPC1-206ENST00000455111 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 TOP6BLQ8N6T0 577 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 CELF5Q8N6W0 485 aaKnown RBP17.23■□□□□ 0.35
GPC1-206ENST00000455111 ZNF507Q8TCN5 953 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 PLEKHO2Q8TD55 490 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
GPC1-206ENST00000455111 MYRFLQ96LU7 910 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 TNMDQ9H2S6 317 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms