RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 BORAQ6PGQ7 559 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 FIP1L1Q6UN15 594 aaKnown RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 RUFY3Q7L099 469 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 PIWIL3Q7Z3Z3 882 aaKnown RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 KIAA2013Q8IYS2 634 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 ETNPPLQ8TBG4 499 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 NRG4Q8WWG1 115 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 RTF1Q92541 710 aaKnown RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF75CPQ92670 426 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 KAT5Q92993 513 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 ATP6V0A1Q93050 837 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF653Q96CK0 615 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 SLC35A4Q96G79 324 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 CCDC120Q96HB5 630 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 MMADHCQ9H3L0 296 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 PRDM13Q9H4Q3 707 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 TAF1DQ9H5J8 278 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 THAP9Q9H5L6 903 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 COPS7BQ9H9Q2 264 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 INCENPQ9NQS7 918 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 SACM1LQ9NTJ5 587 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 IGSF9Q9P2J2 1179 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 CPA4Q9UI42 421 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 ANAPC5Q9UJX4 755 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMEM59LQ9UK28 342 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 CFAP45Q9UL16 551 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 SCAF8Q9UPN6 1271 aaKnown RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 C2CD2Q9Y426 696 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 USP15Q9Y4E8 981 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 CYP46A1Q9Y6A2 500 aa4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P21-201ENST00000452483 A0A0U1RQK1 487 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF320A2RRD8 509 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SH2B2O14492 632 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 VILLO15195 856 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SLC16A6O15403 523 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ASNA1O43681 348 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SYNCRIPO60506 623 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SEC22BO75396 215 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PIAS2O75928 621 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 BBOX1O75936 387 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SASH1O94885 1247 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 LPLP06858 475 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PDE6AP16499 860 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 IFNAR1P17181 557 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PBLDP30039 288 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 GDNFP39905 211 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 EIF2DP41214 584 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TXKP42681 527 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNC1P48547 511 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 MXI1P50539 228 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PPP5CP53041 499 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PRKAA2P54646 552 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 RAD23AP54725 363 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 POLE2P56282 527 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 EPS8Q12929 822 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SLC14A1Q13336 389 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 MPP3Q13368 585 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 IL10RAQ13651 578 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TBCEQ15813 527 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNMB1Q16558 191 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 KYNUQ16719 465 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 DUSP28Q4G0W2 176 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 FYB2Q5VWT5 728 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ESRP1Q6NXG1 681 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ATF7IPQ6VMQ6 1270 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMC6Q7Z403 805 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PXKQ7Z7A4 578 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 GATAD2AQ86YP4 633 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 LURAP1LQ8IV03 231 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 DIS3L2Q8IYB7 885 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZBTB44Q8NCP5 570 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 Q8NFD4 153 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 IL17RDQ8NFM7 739 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 CTCFLQ8NI51 663 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 NPLOC4Q8TAT6 608 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SH3RF3Q8TEJ3 882 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 GRK7Q8WTQ7 553 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ANKRD49Q8WVL7 239 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 HDAC10Q969S8 669 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 EID2BQ96D98 161 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF764Q96H86 408 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SUCLG2Q96I99 432 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 CNDP1Q96KN2 507 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PPP1R13BQ96KQ4 1090 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 AK8Q96MA6 479 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 NEK1Q96PY6 1258 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 UIMC1Q96RL1 719 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TWNKQ96RR1 684 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 PRPF18Q99633 342 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 CITED2Q99967 270 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 NOL10Q9BSC4 688 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 DSCC1Q9BVC3 393 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 HDAC8Q9BY41 377 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms