RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 IFT122Q9HBG6 1241 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 ANAPC7Q9UJX3 599 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 SQORQ9Y6N5 450 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 A0A1W2PPC1 479 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 FAM187AA6NFU0 413 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 GOLGA8KD6RF30 607 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 DARSP14868 501 aaKnown RBP11.37□□□□□ -0.59
PKP4-206ENST00000452162 MYL6P60660 151 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 DR1Q01658 176 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 PTP4A2Q12974 167 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
PKP4-206ENST00000452162 DHX34Q14147 1143 aaKnown RBP11.37□□□□□ -0.59
PKP4-206ENST00000452162 IKBKEQ14164 716 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 DUOXA2Q1HG44 320 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 ZNF568Q3ZCX4 644 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 FAM109BQ6ICB4 259 aaPredicted RBP11.37□□□□□ -0.59
PKP4-206ENST00000452162 PHF13Q86YI8 300 aaPredicted RBP11.37□□□□□ -0.59
PKP4-206ENST00000452162 EFCAB13Q8IY85 973 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 TRIM51Q9BSJ1 452 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 FAM114A2Q9NRY5 505 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 ST3GAL5Q9UNP4 418 aa11.37□□□□□ -0.59
PKP4-206ENST00000452162 UTP11Q9Y3A2 253 aaKnown RBP11.37□□□□□ -0.59
PKP4-206ENST00000452162 GRXCR1A8MXD5 290 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 PTGIRP43119 386 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 LMAN1P49257 510 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 RWDD2BP57060 319 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 WDR5P61964 334 aaKnown RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 CDC42EP1Q00587 391 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 SIX1Q15475 284 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 CYP1B1Q16678 543 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 KCTD19Q17RG1 926 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 HABP4Q5JVS0 413 aaKnown RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 CFAP58Q5T655 872 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 DUPD1Q68J44 220 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 LLGL2Q6P1M3 1020 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.36□□□□□ -0.591e-6■■■■□ 26.6
PKP4-206ENST00000452162 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 SLC13A5Q86YT5 568 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 CD302Q8IX05 232 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 RAB17Q9H0T7 212 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 CDT1Q9H211 546 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 TNFSF13BQ9Y275 285 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 ABHD14A-ACY1A0A1B0GW23 586 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 TCRBV7S2A1N4TA0A589 114 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 THAP12O43422 761 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 BAIAP3O94812 1187 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 CHRNA3P32297 505 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 DEFB103AP81534 67 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 FAM187BQ17R55 369 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 SGSM1Q2NKQ1 1148 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 PPP1R2P3Q6NXS1 205 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 RTN4RL1Q86UN2 441 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 JAMLQ86YT9 394 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 THNSL1Q8IYQ7 743 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 CEP120Q8N960 986 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 LINC01599Q8WXQ3 324 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 APBB2Q92870 758 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 RUFY1Q96T51 708 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 ERP44Q9BS26 406 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
PKP4-206ENST00000452162 XYLT2Q9H1B5 865 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 PCYOX1Q9UHG3 505 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 SLC4A7Q9Y6M7 1214 aa11.36□□□□□ -0.59
PKP4-206ENST00000452162 GOLGA6CA6NDK9 693 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 SOX1O00570 391 aaPredicted RBP11.35□□□□□ -0.59
PKP4-206ENST00000452162 GOLGA6DP0CG33 693 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 SLC1A1P43005 524 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 C1QBPQ07021 282 aaKnown RBP11.35□□□□□ -0.59
PKP4-206ENST00000452162 UAP1Q16222 522 aaPredicted RBP11.35□□□□□ -0.59
PKP4-206ENST00000452162 AMHR2Q16671 573 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 C2CD6Q53TS8 623 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 PLEKHA7Q6IQ23 1121 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 TTC27Q6P3X3 843 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 PHLDB2Q86SQ0 1253 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 C12orf50Q8NA57 414 aaPredicted RBP11.35□□□□□ -0.59
PKP4-206ENST00000452162 ZNF606Q8WXB4 792 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 ARL8AQ96BM9 186 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 C18orf8Q96DM3 657 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 C11orf70Q9BRQ4 267 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 MTIF3Q9H2K0 278 aaKnown RBP11.35□□□□□ -0.59
PKP4-206ENST00000452162 DPH5Q9H2P9 285 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 PRMT7Q9NVM4 692 aaPredicted RBP11.35□□□□□ -0.59
PKP4-206ENST00000452162 GOLGA6AQ9NYA3 693 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 CHD9Q3L8U1 2897 aa11.35□□□□□ -0.59
PKP4-206ENST00000452162 ERICH4A6NGS2 130 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms