RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 RGS16O15492 202 aaPredicted RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 GAS2O43903 313 aaKnown RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ARHGAP1Q07960 439 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 USP4Q13107 963 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 TUBB8Q3ZCM7 444 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ERICH1Q86X53 443 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SDR16C5Q8N3Y7 309 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 AFG1LQ8WV93 481 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SNF8Q96H20 258 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 TWNKQ96RR1 684 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SDCBP2Q9H190 292 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 MROH8Q9H579 483 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 IP6K2Q9UHH9 426 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 GAS8O95995 478 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 KRT1P04264 644 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ITGB3P05106 788 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 LGALS2P05162 132 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ZSCAN5DPP0CG00 497 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 STAG3L1P0CL83 205 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ATF2P15336 505 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 GBP1P32455 592 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ADCYAP1R1P41586 468 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 GRM1Q13255 1194 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SLMAPQ14BN4 828 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 KYNUQ16719 465 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SMTNL2Q2TAL5 461 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SPDYCQ5MJ68 293 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 JADE1Q6IE81 842 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 RAPGEF5Q92565 580 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SLCO2A1Q92959 643 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SMYD3Q9H7B4 428 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-202ENST00000451716 TCRBV5S1A1TA0A578 114 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 B4GALT4O60513 344 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 PYGBP11216 843 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 ETS1P14921 441 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 ADORA2AP29274 412 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 PTK6Q13882 451 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 QPCTQ16769 361 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 PTPN20Q4JDL3 420 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 EXD1Q8NHP7 514 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 WHRNQ9P202 907 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 SAE1Q9UBE0 346 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-202ENST00000451716 ANAPC5Q9UJX4 755 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 DNPEPQ9ULA0 475 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 PIK3R2O00459 728 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 CALB1P05937 261 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 IMPDH2P12268 514 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 IBSPP21815 317 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-202ENST00000451716 RFC1P35251 1148 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-202ENST00000451716 BYSLQ13895 437 aaKnown RBP12.74□□□□□ -0.37
COL27A1-202ENST00000451716 TAPT1Q6NXT6 567 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 RHBDF2Q6PJF5 856 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 ZNF365Q70YC5 407 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 EMC1Q8N766 993 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 MAIP1Q8WWC4 291 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 SLITRK1Q96PX8 696 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 ARPC5LQ9BPX5 153 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 CTNNAL1Q9UBT7 734 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 GINS2Q9Y248 185 aa12.74□□□□□ -0.37
COL27A1-202ENST00000451716 RASGRF2O14827 1237 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 ITIH2P19823 946 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 RAB27AP51159 221 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 ARMC9Q7Z3E5 817 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 JOSD2Q8TAC2 188 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 C10orf88Q9H8K7 445 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 ZWILCHQ9H900 591 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 TNFSF13BQ9Y275 285 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 TRAPPC3O43617 180 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
COL27A1-202ENST00000451716 FAM107AO95990 144 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 CHN1P15882 459 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 SLC26A2P50443 739 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 CCDC15Q0P6D6 951 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 SURF1Q15526 300 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 CCNG2Q16589 344 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 HP1BP3Q5SSJ5 553 aaPredicted RBP12.73□□□□□ -0.37
COL27A1-202ENST00000451716 FAM182AQ5T1J6 154 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 GRK7Q8WTQ7 553 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 PLEKHG4BQ96PX9 1271 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 SLX1AQ9BQ83 275 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 ADAM7Q9H2U9 754 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 NEU2Q9Y3R4 380 aa12.73□□□□□ -0.37
COL27A1-202ENST00000451716 ASB14A6NK59 587 aa12.72□□□□□ -0.37
COL27A1-202ENST00000451716 ARF4P18085 180 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms