RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 MTSS1LQ765P7 747 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 KBTBD7Q8WVZ9 684 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 MRPL45Q9BRJ2 306 aaKnown RBP12.86□□□□□ -0.35
SMPD4-212ENST00000451542 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
SMPD4-212ENST00000451542 NIF3L1Q9GZT8 377 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 FAM124BQ9H5Z6 455 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-212ENST00000451542 CD320Q9NPF0 282 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 RAB20Q9NX57 234 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 EPS15L1Q9UBC2 864 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 LIMD1Q9UGP4 676 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 ZMYM5Q9UJ78 669 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 SORCS3Q9UPU3 1222 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 DENND4AQ7Z401 1863 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 CUL9Q8IWT3 2517 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 MYO10Q9HD67 2058 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 P4HA2O15460 535 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 CSH1P0DML2 217 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 CSH2P0DML3 217 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 MYL4P12829 197 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 MAGEA11P43364 429 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 YWHAEP62258 255 aaKnown RBP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 C1orf220Q5T0J3 134 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 FAM171BQ6P995 826 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 DNAJB7Q7Z6W7 309 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 LRRTM3Q86VH5 581 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 OSTM1Q86WC4 334 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 UBALD2Q8IYN6 164 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 FGF13Q92913 245 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 PSMG2Q969U7 264 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 CEP72Q9P209 647 aa12.85□□□□□ -0.35
SMPD4-212ENST00000451542 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMPD4-212ENST00000451542 DOCK6Q96HP0 2047 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 MYBPHLA2RUH7 354 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 TRIM66O15016 1216 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 PTPN1P18031 435 aaKnown RBP12.84□□□□□ -0.35
SMPD4-212ENST00000451542 LMO2P25791 158 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 CDC25CP30307 473 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 GRIK1P39086 918 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 EPHA5P54756 1037 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
SMPD4-212ENST00000451542 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
SMPD4-212ENST00000451542 NTHL1P78549 312 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 SCARA3Q6AZY7 606 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 SCN4BQ8IWT1 228 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 MYADMQ96S97 322 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 ELOVL4Q9GZR5 314 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 MUTYHQ9UIF7 546 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 COQ4Q9Y3A0 265 aa12.84□□□□□ -0.35
SMPD4-212ENST00000451542 PMM2O15305 246 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 VNN2O95498 520 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-212ENST00000451542 FMO5P49326 533 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 CDH8P55286 799 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 TDGQ13569 410 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 GPT2Q8TD30 523 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 EDAQ92838 391 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 MYLPFQ96A32 169 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 PKMYT1Q99640 499 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 MED10Q9BTT4 135 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 BCO2Q9BYV7 579 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 CRISPLD1Q9H336 500 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 ATXN3LQ9H3M9 355 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 SLITRK6Q9H5Y7 841 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 KCNK12Q9HB15 430 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 DOCK8Q8NF50 2099 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 EYSQ5T1H1 3165 aa12.83□□□□□ -0.36
SMPD4-212ENST00000451542 ATP2C2O75185 946 aa12.82□□□□□ -0.36
SMPD4-212ENST00000451542 AFPP02771 609 aaKnown RBP12.82□□□□□ -0.36
SMPD4-212ENST00000451542 CYP2F1P24903 491 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms