RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 FAXDC2Q96IV6 333 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 MKS1Q9NXB0 559 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 TRHDEQ9UKU6 1024 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 RUVBL1Q9Y265 456 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 PCDHGA8Q9Y5G5 932 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 NOX1Q9Y5S8 564 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 CNTNAP1P78357 1384 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 ARFGEF1Q9Y6D6 1849 aa5.5□□□□□ -1.53
GTF3C3-207ENST00000451088 TAF1LQ8IZX4 1826 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 KIF13BQ9NQT8 1826 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 TCRBV7S2A1N4TA0A589 114 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 GPANK1O95872 356 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 NUDT3O95989 172 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 MMP10P09238 476 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 CDK11BP21127 795 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 FDXRP22570 491 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 MPLP40238 635 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 CLK3P49761 638 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 CDKN1CP49918 316 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 HSD11B2P80365 405 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 MAP2K1Q02750 393 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 TARDBPQ13148 414 aaKnown RBP eCLIP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 MTMR1Q13613 665 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 CYP2A13Q16696 494 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 NLGN4YQ8NFZ3 816 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 SLC9A6Q92581 669 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 CAVIN3Q969G5 261 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 C11orf54Q9H0W9 315 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 GSTO2Q9H4Y5 243 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 RIOX1Q9H6W3 641 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 GALNT9Q9HCQ5 603 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 HSFX1Q9UBD0 423 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 SAP30BPQ9UHR5 308 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 ZNHIT2Q9UHR6 403 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 IPPQ9Y573 584 aa5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 BRCA1P38398 1863 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-207ENST00000451088 PKD1L3Q7Z443 1732 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 PIK3C2AO00443 1686 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 ANKRD36BQ8N2N9 1353 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 TONSLQ96HA7 1378 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 CDHR4A6H8M9 788 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 KLHL33A6NCF5 533 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 MYADML2A6NDP7 307 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 SGTAO43765 313 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 MT-CO1P00395 513 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 GUCY2FP51841 1108 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 NOMO3P69849 1222 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 CDC42EP1Q00587 391 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 AMPD3Q01432 767 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 SLFN5Q08AF3 891 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 MPP3Q13368 585 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 PRR16Q569H4 304 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 NOMO2Q5JPE7 1267 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 MIGA2Q7L4E1 593 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 HDAC10Q969S8 669 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 MARS2Q96GW9 593 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 PUS7Q96PZ0 661 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 MED15Q96RN5 788 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 PNKPQ96T60 521 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 TERF2IPQ9NYB0 399 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 USP25Q9UHP3 1055 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 ABCC6O95255 1503 aa5.48□□□□□ -1.53
GTF3C3-207ENST00000451088 NSD2O96028 1365 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 KTN1Q86UP2 1357 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 USP47Q96K76 1375 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 GABRDO14764 452 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 HTRA2O43464 458 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 HAUS5O94927 633 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 FBLP22087 321 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 EDNRBP24530 442 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 SLC6A4P31645 630 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 SLC16A1P53985 500 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 CREMQ03060 361 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 ATP2B3Q16720 1220 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 DEFB115Q30KQ5 88 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 Q8NA96 180 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 IFI44Q8TCB0 444 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 RNF31Q96EP0 1072 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 Q96MF0 132 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 TDP1Q9NUW8 608 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 LIMCH1Q9UPQ0 1083 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 KIAA1551Q9HCM1 1747 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 UBR3Q6ZT12 1888 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 CPSF1Q10570 1443 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 TTC21BQ7Z4L5 1316 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 USP54Q70EL1 1684 aa5.47□□□□□ -1.53
GTF3C3-207ENST00000451088 PCSK5Q92824 1860 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 KIAA0391O15091 583 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 ZFPL1O95159 310 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 MYBL2P10244 700 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 VAV2P52735 878 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 ACAP2Q15057 778 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 ABCB5Q2M3G0 1257 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms