RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 MAGEB2O15479 319 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 STAG3L1P0CL83 205 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 NCF1P14598 390 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-208ENST00000450102 PSMC6P62333 389 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 ORC2Q13416 577 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-208ENST00000450102 GALNTL6Q49A17 601 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 CNPY4Q8N129 248 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
SCN5A-208ENST00000450102 RBBP8NLQ8NC74 664 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-208ENST00000450102 DPF3Q92784 378 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 STK33Q9BYT3 514 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 EYA4O95677 639 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 PTGER2P43116 358 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 USP11P51784 963 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 FAM83EQ2M2I3 478 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 NAPEPLDQ6IQ20 393 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 FAR2Q96K12 515 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 TIPINQ9BVW5 301 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-208ENST00000450102 STON1Q9Y6Q2 735 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 A0A087X0T9 212 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 MGAT4DA6NG13 374 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 VPS26AO75436 327 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 IL18RAPO95256 599 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 TTC33Q6PID6 262 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-208ENST00000450102 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 BARHL2Q9NY43 387 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 MKL2Q9ULH7 1088 aa11.28□□□□□ -0.6
SCN5A-208ENST00000450102 PIPSLA2A3N6 862 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PMPCBO75439 489 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PSMC3P17980 439 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 KCNA3P22001 575 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 HIRAP54198 1017 aaPredicted RBP11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.6
SCN5A-208ENST00000450102 EFHC1Q5JVL4 640 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 HLA-DQA1Q5Y7H0 255 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 RNF180Q86T96 592 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PRPF39Q86UA1 669 aaKnown RBP11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CDK20Q8IZL9 346 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 SEPT1Q8WYJ6 367 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PIGBQ92521 554 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 SH3GL1Q99961 368 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 ADAM30Q9UKF2 790 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 KLHL20Q9Y2M5 609 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 TRPC5OSA6NMA1 111 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 NUDT14O95848 222 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PRR29P0C7W0 189 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CYP2C9P11712 490 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 MAPK1P28482 360 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 AVPR1AP37288 418 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 COX10Q12887 443 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CYLC2Q14093 348 aaPredicted RBP11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 BNIPLQ7Z465 357 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 TLK2Q86UE8 772 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.27□□□□□ -0.6
SCN5A-208ENST00000450102 RNFT2Q96EX2 444 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 GOLPH3Q9H4A6 298 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 MRPL39Q9NYK5 338 aaKnown RBP11.27□□□□□ -0.6
SCN5A-208ENST00000450102 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CDY2AQ9Y6F7 541 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 HEG1Q9ULI3 1381 aa11.27□□□□□ -0.6
SCN5A-208ENST00000450102 GNG14A0A1W2PPG7 69 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 PP2D1A8MPX8 630 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 DGAT1O75907 488 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 FAM200BP0CF97 657 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.61
SCN5A-208ENST00000450102 SGF29Q96ES7 293 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 FOXP3Q9BZS1 431 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 ARMC7Q9H6L4 198 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 GJB4Q9NTQ9 266 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 MCM8Q9UJA3 840 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
SCN5A-208ENST00000450102 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 GPD1P21695 349 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 TALDO1P37837 337 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 PAN2Q504Q3 1202 aaKnown RBP11.27□□□□□ -0.61
SCN5A-208ENST00000450102 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 ZCCHC8Q6NZY4 707 aaKnown RBP11.27□□□□□ -0.61
SCN5A-208ENST00000450102 C3orf62Q6ZUJ4 267 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 LRRC8DQ7L1W4 858 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 SETD3Q86TU7 594 aaPredicted RBP11.27□□□□□ -0.61
SCN5A-208ENST00000450102 SPATA18Q8TC71 538 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 FAM45AQ8TCE6 357 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 ZNF669Q96BR6 464 aaPredicted RBP11.27□□□□□ -0.61
SCN5A-208ENST00000450102 ATP6V1HQ9UI12 483 aa11.27□□□□□ -0.61
SCN5A-208ENST00000450102 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms