RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RBM44Q6ZP01 1051 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 C1orf186Q6ZWK4 172 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ACAD11Q709F0 780 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 MTDHQ86UE4 582 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 SRRM1Q8IYB3 904 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 WDR11Q9BZH6 1224 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 LCTP09848 1927 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 SSC5DA1L4H1 1573 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 C1orf228Q6PIY5 440 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 CCDC137Q6PK04 289 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 SRPK1Q96SB4 655 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 EBF3Q9H4W6 596 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 PPCSQ9HAB8 311 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 WHRNQ9P202 907 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 UVRAGQ9P2Y5 699 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 TBK1Q9UHD2 729 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 CROTQ9UKG9 612 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 DHX15O43143 795 aaKnown RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 NDUFB5O43674 189 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 PGM3O95394 542 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 GTF2H1P32780 548 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SNRPFP62306 86 aaKnown RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 MED21Q13503 144 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 RINT1Q6NUQ1 792 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SAMD7Q7Z3H4 446 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 PHLDB2Q86SQ0 1253 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 MICALL2Q8IY33 904 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SPOCK2Q92563 424 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 GFM2Q969S9 779 aaKnown RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 EPB41L1Q9H4G0 881 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 HACL1Q9UJ83 578 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 RSPH10B2B2RC85 870 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 NFIBO00712 420 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 VILLO15195 856 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZNF862O60290 1169 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 AKAP3O75969 853 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 BAG2O95816 211 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 RSPH10BP0C881 870 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 CRABP2P29373 138 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 CDC16Q13042 620 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SEPT7Q16181 437 aaKnown RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZNF362Q5T0B9 420 aaPredicted RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 MXRA8Q9BRK3 442 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 BHMT2Q9H2M3 363 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SBF1O95248 1867 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 KRT38O76015 456 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZWINTO95229 277 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 NFKBIAP25963 317 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 TNFAIP1Q13829 316 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLC45A4Q5BKX6 768 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SPDYAQ5MJ70 313 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 GET4Q7L5D6 327 aaPredicted RBP14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 CLNKQ7Z7G1 428 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZBED8Q8IZ13 594 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 SNX27Q96L92 541 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZSWIM1Q9BR11 485 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 TUBB6Q9BUF5 446 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 UBAP1Q9NZ09 502 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 EXOC7Q9UPT5 735 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ALG6Q9Y672 507 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZMYM2Q9UBW7 1377 aa14.13□□□□□ -0.15
SYNGAP1-204ENST00000449372 ARHGEF35A5YM69 484 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 GZMAP12544 262 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ANPEPP15144 967 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 CYP4A11Q02928 519 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 TCEAL1Q15170 157 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ARHGAP44Q17R89 818 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 NLRP9Q7RTR0 991 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 C10orf82Q8WW14 230 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 C18orf8Q96DM3 657 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 USP29Q9HBJ7 922 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZBTB39O15060 712 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ERFP50548 548 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 UBXN2AP68543 259 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 IL31RAQ8NI17 732 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 CYTH2Q99418 400 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 TTC1Q99614 292 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 NDE1Q9NXR1 346 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 MYH11P35749 1972 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ATF2P15336 505 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 MFAP3P55082 362 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 PPATQ06203 517 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 KLHDC10Q6PID8 442 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 KSR1Q8IVT5 923 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 UBN1Q9NPG3 1134 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 SENP1Q9P0U3 644 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ASTN1O14525 1302 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZNF541Q9H0D2 1346 aa14.12□□□□□ -0.15
SYNGAP1-204ENST00000449372 CFAP69A5D8W1 941 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 A8MXQ7 604 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CLIC2O15247 247 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 THAP12O43422 761 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 ADCY3O60266 1144 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 AMPD1P23109 780 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CTTNQ14247 550 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms