RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SLC44A2Q8IWA5 706 aaPredicted RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 CGRRF1Q99675 332 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 ZNF556Q9HAH1 456 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 LNPEPQ9UIQ6 1025 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 GYG2O15488 501 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 PDXDC1Q6P996 788 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 GPC2Q8N158 579 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 CCDC33Q8N5R6 958 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 TRIML2Q8N7C3 387 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 NCF1BA6NI72 391 aaPredicted RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 NCF1CA8MVU1 366 aaPredicted RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 NCF1P14598 390 aaPredicted RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 RASA1P20936 1047 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 KLRK1P26718 216 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 PMS2P54278 862 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 UBE3AQ05086 875 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 MRPL40Q9NQ50 206 aaKnown RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 GRIK4Q16099 956 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 UGT3A1Q6NUS8 523 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 SYTL1Q8IYJ3 562 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 PPP1R2P1Q96PQ5 205 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 ELAC2Q9BQ52 826 aaKnown RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 APEX2Q9UBZ4 518 aa13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 TRMT6Q9UJA5 497 aaKnown RBP13.29□□□□□ -0.28
AC006001.3-201ENST00000449307 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 PDZK1P1A8MUH7 402 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 CCDC188H7C350 402 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 CYP7B1O75881 506 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 DCTN3O75935 186 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 ZSCAN26Q16670 478 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 SPATS2Q86XZ4 545 aaKnown RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 SERPINI2O75830 405 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 CHI3L1P36222 383 aaPredicted RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 ZFP69BQ9UJL9 534 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 SKOR1P84550 965 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 FAR2Q96K12 515 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 DYRK1BQ9Y463 629 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 PDXKO00764 312 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 GJC2Q5T442 439 aaPredicted RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 FAM136AQ96C01 138 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 ZC4H2Q9NQZ6 224 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 SNTG2Q9NY99 539 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 SRP72O76094 671 aaKnown RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 AKAP5P24588 427 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 GTF2E2P29084 291 aaKnown RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 TRMT11Q7Z4G4 463 aaKnown RBP13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 FAM162AQ96A26 154 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 FAM118BQ9BPY3 351 aa13.28□□□□□ -0.28
AC006001.3-201ENST00000449307 ALDH18A1P54886 795 aaKnown RBP13.27□□□□□ -0.28
AC006001.3-201ENST00000449307 MMGT1Q8N4V1 131 aa13.27□□□□□ -0.28
AC006001.3-201ENST00000449307 FAM96AQ9H5X1 160 aa13.27□□□□□ -0.28
AC006001.3-201ENST00000449307 GLI2P10070 1586 aa13.27□□□□□ -0.28
AC006001.3-201ENST00000449307 POU4F1Q01851 419 aa13.27□□□□□ -0.28
AC006001.3-201ENST00000449307 MTSS1LQ765P7 747 aa13.27□□□□□ -0.28
AC006001.3-201ENST00000449307 C21orf59P57076 290 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 C1orf146Q5VVC0 180 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 ARHGEF26Q96DR7 871 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MTMR12Q9C0I1 747 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 DMAP1Q9NPF5 467 aaPredicted RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 TET3O43151 1660 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MED14O60244 1454 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 CCDC159P0C7I6 412 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 ABCE1P61221 599 aaKnown RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 RFX8Q6ZV50 586 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 ANKRD49Q8WVL7 239 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 NLNQ9BYT8 704 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 SPG21Q9NZD8 308 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 CEP152O94986 1710 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 LAMC1P11047 1609 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 SLC1A1P43005 524 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 XRRA1Q6P2D8 792 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 TRIM65Q6PJ69 517 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 CALML6Q8TD86 181 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 ACSF2Q96CM8 615 aaPredicted RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 NIF3L1Q9GZT8 377 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 A0A087WZ62 844 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MEI4A8MW99 385 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 H3BRB1 525 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 SLC16A3O15427 465 aaKnown RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 GAS2O43903 313 aaKnown RBP13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MMEP08473 750 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 NR1D1P20393 614 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 CLYBLQ8N0X4 340 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 PPP1R13LQ8WUF5 828 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 MED8Q96G25 268 aa13.27□□□□□ -0.29
AC006001.3-201ENST00000449307 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms