RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SLC18A3Q16572 532 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 ASTE1Q2TB18 679 aaPredicted RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 USP41Q3LFD5 358 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 CTXN3Q4LDR2 81 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 PPP1R26Q5T8A7 1209 aaPredicted RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 SMYD5Q6GMV2 418 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 KIAA1841Q6NSI8 718 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 SPRED2Q7Z698 418 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 TMEM209Q96SK2 561 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 CRTAC1Q9NQ79 661 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 CDH9Q9ULB4 789 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 M0QYV0 167 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 O00370 1275 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 C2CD2LO14523 706 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 OAZ2O95190 189 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 CSPG5O95196 566 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 SOD2P04179 222 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 OR4Q2P0C623 313 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 DNAJB2P25686 324 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 ANXA13P27216 316 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 ADORA2BP29275 332 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 PBX2P40425 430 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 GOLGA7BQ2TAP0 167 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 INTS6LQ5JSJ4 861 aaKnown RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 PRSS55Q6UWB4 352 aaPredicted RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 CRYBG2Q8N1P7 616 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 KLHL23Q8NBE8 558 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 RIN2Q8WYP3 895 aaPredicted RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 PCDHB18PQ96TA0 734 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 ACBD6Q9BR61 282 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 C17orf80Q9BSJ5 609 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 TSPAN16Q9UKR8 245 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.54■□□□□ 0.08
TNF-208ENST00000449264 CHD9Q3L8U1 2897 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 CHD7Q9P2D1 2997 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 MYBPHLA2RUH7 354 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 EIF3CLB5ME19 914 aaKnown RBP15.53■□□□□ 0.08
TNF-208ENST00000449264 ZNF263O14978 683 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 MICAL2O94851 1124 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 EFEMP2O95967 443 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 CA8P35219 290 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 RGS19P49795 217 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 KRT17Q04695 432 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 SPA17Q15506 151 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 CCDC122Q5T0U0 273 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 DDX53Q86TM3 631 aaKnown RBP15.53■□□□□ 0.08
TNF-208ENST00000449264 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 RNF168Q8IYW5 571 aaPredicted RBP15.53■□□□□ 0.08
TNF-208ENST00000449264 VPS52Q8N1B4 723 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 SLC2A14Q8TDB8 520 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 CYFIP2Q96F07 1278 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 EIF3CQ99613 913 aaKnown RBP15.53■□□□□ 0.08
TNF-208ENST00000449264 MED10Q9BTT4 135 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 HERC2P3Q9BVR0 1158 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 GTF3C4Q9UKN8 822 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 KIAA1257Q9ULG3 409 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 YBX2Q9Y2T7 364 aaKnown RBP15.53■□□□□ 0.08
TNF-208ENST00000449264 PCDHA11Q9Y5I1 949 aa15.53■□□□□ 0.08
TNF-208ENST00000449264 PTPRDP23468 1912 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 URODP06132 367 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 BMPR1AP36894 532 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 GLUD2P49448 558 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 ARPP19P56211 112 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 PSMD5Q16401 504 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 NAA35Q5VZE5 725 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 DENND1BQ6P3S1 775 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 ALKBH5Q6P6C2 394 aaKnown RBP15.52■□□□□ 0.08
TNF-208ENST00000449264 ANKS3Q6ZW76 656 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 C1orf131Q8NDD1 294 aaKnown RBP15.52■□□□□ 0.08
TNF-208ENST00000449264 SLC30A5Q8TAD4 765 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 MYLPFQ96A32 169 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 PBX4Q9BYU1 374 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 TAS2R14Q9NYV8 317 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 HESX1Q9UBX0 185 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 NAGPAQ9UK23 515 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 PCDHGC3Q9UN70 934 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 ZKSCAN5Q9Y2L8 839 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 RWDD3Q9Y3V2 267 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 CEP83Q9Y592 693 aa15.52■□□□□ 0.08
TNF-208ENST00000449264 H7C4K7 107 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CLDN5O00501 218 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CPB1P15086 417 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 RPL17P18621 184 aaKnown RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 MRPL58Q14197 206 aaKnown RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 STILQ15468 1287 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CNGA2Q16280 664 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CLEC16AQ2KHT3 1053 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 SLC39A12Q504Y0 691 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 ARHGAP17Q68EM7 881 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 LCLAT1Q6UWP7 414 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 TRIM72Q6ZMU5 477 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 TDHQ8IZJ6 230 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 UBA3Q8TBC4 463 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 MYCBPAPQ8TBZ2 947 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CPA5Q8WXQ8 436 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 AUTS2Q8WXX7 1259 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 PCED1BQ96HM7 432 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 ALG13Q9NP73 1137 aaKnown RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 CHST7Q9NS84 486 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms