RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 UGT3A1Q6NUS8 523 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 CGRRF1Q99675 332 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 MTMR12Q9C0I1 747 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 ECT2Q9H8V3 914 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 RRAGCQ9HB90 399 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 WARS2Q9UGM6 360 aaKnown RBP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 DPP7Q9UHL4 492 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 SLC25A13Q9UJS0 675 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 DDTLA6NHG4 134 aaPredicted RBP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 PPP1R3GB7ZBB8 358 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 KRT16P08779 473 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 FGFR2P21802 821 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 DSG3P32926 999 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 PEX19P40855 299 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 GEMP55040 296 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 EPC2Q52LR7 807 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 SEZ6Q53EL9 994 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 GPRC5CQ9NQ84 441 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 PTK7Q13308 1070 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 TTC39BQ5VTQ0 682 aaPredicted RBP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 ANO5Q75V66 913 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 OOSP2Q86WS3 158 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 MRGBPQ9NV56 204 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 ASS1P00966 412 aaKnown RBP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 CHRM3P20309 590 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 C4orf19Q8IY42 314 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 ZNF507Q8TCN5 953 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 CPB2Q96IY4 423 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 MTG1Q9BT17 334 aaPredicted RBP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 FRMD8P1Q9BZ68 369 aaPredicted RBP10.63□□□□□ -0.71
SCN10A-201ENST00000449082 SALL1Q9NSC2 1324 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 GTF3C4Q9UKN8 822 aa10.63□□□□□ -0.71
SCN10A-201ENST00000449082 STX7O15400 261 aaKnown RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 TGFB3P10600 412 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 PRUNE1Q86TP1 453 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 PPIL6Q8IXY8 311 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 PCMTD2Q9NV79 361 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 TRPM5Q9NZQ8 1165 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 HEATR9A2RTY3 570 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 TTLL13PA6NNM8 815 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 PSTPIP1O43586 416 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 STRNO43815 780 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 EFCAB14O75071 495 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 SNRPAP09012 282 aaKnown RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 KLK7P49862 253 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 BCAT1P54687 386 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 EPHB3P54753 998 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 HERVK_113P62684 666 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 MED21Q13503 144 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 INPP5AQ14642 412 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 C3orf62Q6ZUJ4 267 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ACOT1Q86TX2 421 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 JAMLQ86YT9 394 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 C9orf72Q96LT7 481 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 KIAA1683Q9H0B3 1180 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 PCDHB12Q9Y5F1 795 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 C2orf81A6NN90 581 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 DDNO94850 711 aaPredicted RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 FBXO21O94952 628 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ARIH2O95376 493 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ALDH18A1P54886 795 aaKnown RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 TTLL9Q3SXZ7 439 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 EFL1Q7Z2Z2 1120 aaKnown RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 PPP1R36Q96LQ0 422 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ETNK1Q9HBU6 452 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 GIMAP4Q9NUV9 329 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 KANSL3Q9P2N6 904 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 IPPQ9Y573 584 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 HOXC6P09630 235 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 MAGEA4P43358 317 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ELAVL2Q12926 359 aaKnown RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 ZNF280DQ6N043 979 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 TIGD7Q6NT04 549 aaPredicted RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 TRIM48Q8IWZ4 208 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 SYTL5Q8TDW5 730 aaPredicted RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 DPF3Q92784 378 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 CCDC90BQ9GZT6 254 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 CDV3Q9UKY7 258 aaKnown RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 MEGF6O75095 1541 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 HIST2H2ACQ16777 129 aaPredicted RBP10.62□□□□□ -0.71
SCN10A-201ENST00000449082 LONRF1Q17RB8 773 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 HIST2H2AA3Q6FI13 130 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 WDR49Q8IV35 697 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 FAM71DQ8N9W8 422 aa10.62□□□□□ -0.71
SCN10A-201ENST00000449082 RSPH10B2B2RC85 870 aa10.61□□□□□ -0.71
SCN10A-201ENST00000449082 RNASEH1O60930 286 aaKnown RBP10.61□□□□□ -0.71
SCN10A-201ENST00000449082 RSPH10BP0C881 870 aa10.61□□□□□ -0.71
SCN10A-201ENST00000449082 STIP1P31948 543 aaKnown RBP10.61□□□□□ -0.71
SCN10A-201ENST00000449082 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
SCN10A-201ENST00000449082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.61□□□□□ -0.71
SCN10A-201ENST00000449082 SPATA21Q7Z572 469 aa10.61□□□□□ -0.71
SCN10A-201ENST00000449082 PRMT1Q99873 361 aaKnown RBP10.61□□□□□ -0.71
SCN10A-201ENST00000449082 PKD2L2Q9NZM6 624 aa10.61□□□□□ -0.71
SCN10A-201ENST00000449082 FAM32AQ9Y421 112 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms