RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 CDH8P55286 799 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 PSMC1P62191 440 aaKnown RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 TYRO3Q06418 890 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 C4orf50Q6ZRC1 276 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 ENOX1Q8TC92 643 aaKnown RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 FAXDC2Q96IV6 333 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 RPGRIP1Q96KN7 1286 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 TNIP3Q96KP6 325 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 ZNF512Q96ME7 567 aaPredicted RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 NAT10Q9H0A0 1025 aaKnown RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 APOBEC3GQ9HC16 384 aaKnown RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 WDR6Q9NNW5 1121 aaKnown RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 COQ4Q9Y3A0 265 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 TSC2P49815 1807 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 CLUHO75153 1309 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 MYBPHLA2RUH7 354 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 PMM2O15305 246 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 HCRTO43612 131 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 PAPLNO95428 1278 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 HAPLN1P10915 354 aaPredicted RBP14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 CYP27A1Q02318 531 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 VEPH1Q14D04 833 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 TAF12Q16514 161 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 FAM171BQ6P995 826 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 GRASPQ7Z6J2 395 aaPredicted RBP14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 TTC39CQ8N584 583 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 FAM200AQ8TCP9 573 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 KHSRPQ92945 711 aaKnown RBP eCLIP14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 ACSF2Q96CM8 615 aaPredicted RBP14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 BCO2Q9BYV7 579 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 SDCBP2Q9H190 292 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 DNAJC25Q9H1X3 360 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 EPHX3Q9H6B9 360 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 CD320Q9NPF0 282 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 TMLHEQ9NVH6 421 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 RAPGEFL1Q9UHV5 662 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 NFE2L3Q9Y4A8 694 aa14.96□□□□□ -0.01
GTF3C3-206ENST00000448539 ATP2C2O75185 946 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 LRRN2O75325 713 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 VNN2O95498 520 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 TPM2P07951 284 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 PRKCSHP14314 528 aaPredicted RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 PTPN2P17706 415 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 PTPN1P18031 435 aaKnown RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 CD58P19256 250 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 SP100P23497 879 aaPredicted RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 ZP2Q05996 745 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 LRMPQ12912 555 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 PABPC1LQ4VXU2 614 aaKnown RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 HSP90AA4PQ58FG1 418 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 MDH1BQ5I0G3 518 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 CYP4A22Q5TCH4 519 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 C11orf57Q6ZUT1 292 aaPredicted RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 OTOP3Q7RTS5 596 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 ITIH5Q86UX2 942 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 UNC93AQ86WB7 457 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 TTC9BQ8N6N2 239 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 B3GALNT2Q8NCR0 500 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 FEZF2Q8TBJ5 459 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 MYCBPAPQ8TBZ2 947 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 MYLPFQ96A32 169 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 FUBP3Q96I24 572 aaKnown RBP eCLIP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 NT5C1BQ96P26 610 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 CORO1BQ9BR76 489 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 CRISPLD1Q9H336 500 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 DPEP3Q9H4B8 488 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 ABCB6Q9NP58 842 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 DNMT3BQ9UBC3 853 aaKnown RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 ASB3Q9Y575 518 aa14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 MTCL1Q9Y4B5 1905 aaKnown RBP14.95□□□□□ -0.02
GTF3C3-206ENST00000448539 ATP8B3O60423 1300 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 KCNJ18B7U540 433 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 SOAT2O75908 522 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 RHOP08100 348 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 FSHRP23945 695 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 TBXAS1P24557 533 aaPredicted RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 GBP2P32456 591 aaPredicted RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 NDST1P52848 882 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 YWHAEP62258 255 aaKnown RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 RPL10AP62906 217 aaKnown RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 MYL5Q02045 173 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 KCNJ12Q14500 433 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 MAN2A1Q16706 1144 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 CFAP221Q4G0U5 840 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 PDZD4Q76G19 769 aaPredicted RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 IRF2BP1Q8IU81 584 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 GJD3Q8N144 294 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 TDRD5Q8NAT2 981 aaKnown RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 LEMD2Q8NC56 503 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 ANKRD20A12PQ8NF67 263 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 TATDN2Q93075 761 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 PKMYT1Q99640 499 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 C1QTNF1Q9BXJ1 281 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 FAM124BQ9H5Z6 455 aaPredicted RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 ASAH2Q9NR71 780 aa14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 SAMSN1Q9NSI8 373 aaKnown RBP14.94□□□□□ -0.02
GTF3C3-206ENST00000448539 HCFC1R1Q9NWW0 138 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms