RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GPS1Q13098 491 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 BYSLQ13895 437 aaKnown RBP15.62■□□□□ 0.09
SF1-211ENST00000448404 NPNTQ6UXI9 565 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 SPOCD1Q6ZMY3 1216 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 ANKMY2Q8IV38 441 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 KATNAL2Q8IYT4 538 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 NETO2Q8NC67 525 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 TRIM11Q96F44 468 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 HEXIM2Q96MH2 286 aaKnown RBP15.62■□□□□ 0.09
SF1-211ENST00000448404 PLVAPQ9BX97 442 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 KIF9Q9HAQ2 790 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 SPON1Q9HCB6 807 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 GPATCH2LQ9NWQ4 482 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 CACNG4Q9UBN1 327 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 M0QYV0 167 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 HBP1O60381 514 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 LRCH4O75427 683 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 SNAI1O95863 264 aaPredicted RBP15.62■□□□□ 0.09
SF1-211ENST00000448404 FAM107AO95990 144 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 GAS8O95995 478 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 KRT3P12035 628 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 IGFBP6P24592 240 aaPredicted RBP15.62■□□□□ 0.09
SF1-211ENST00000448404 PTK6Q13882 451 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 TRNP1Q6NT89 227 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 EP400NLQ6ZTU2 488 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 ILDR2Q71H61 639 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.096e-15■■■■□ 22.3
SF1-211ENST00000448404 THOC1Q96FV9 657 aaKnown RBP15.62■□□□□ 0.09
SF1-211ENST00000448404 XPO6Q96QU8 1125 aaKnown RBP15.62■□□□□ 0.09
SF1-211ENST00000448404 KCNK9Q9NPC2 374 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 IP6K2Q9UHH9 426 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 GJD2Q9UKL4 321 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 SCINQ9Y6U3 715 aa15.62■□□□□ 0.09
SF1-211ENST00000448404 PSTPIP1O43586 416 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 HOOK3Q86VS8 718 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 SGK1O00141 431 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 LIASO43766 372 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 MICAL2O94851 1124 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 ATP11AP98196 1134 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 ZKSCAN8Q15776 578 aaPredicted RBP15.61■□□□□ 0.09
SF1-211ENST00000448404 TRIM72Q6ZMU5 477 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 CPLX4Q7Z7G2 160 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 LRRC34Q8IZ02 419 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 EXD1Q8NHP7 514 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 C18orf25Q96B23 403 aaPredicted RBP15.61■□□□□ 0.09
SF1-211ENST00000448404 FAM81BQ96LP2 452 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 C16orf70Q9BSU1 422 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 SAYSD1Q9NPB0 183 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 KLK14Q9P0G3 267 aa15.61■□□□□ 0.09
SF1-211ENST00000448404 A0A087WUV0 522 aaPredicted RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 H3BRB1 525 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 PECAM1P16284 738 aaPredicted RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 SMPD1P17405 629 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 KLRC2P26717 231 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 MNAT1P51948 309 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 ZNF200P98182 395 aaPredicted RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 PPP1R15BQ5SWA1 713 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 EMC10Q5UCC4 262 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 ANKRD22Q5VYY1 191 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 ARFGAP2Q8N6H7 521 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CXorf38Q8TB03 319 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 ATXN2LQ8WWM7 1075 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 ARHGEF2Q92974 986 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 ZMAT2Q96NC0 199 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 RBM15Q96T37 977 aaKnown RBP eCLIP15.6■□□□□ 0.094e-9■□□□□ 10.2
SF1-211ENST00000448404 EIF2AQ9BY44 585 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 B3GNT5Q9BYG0 378 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 TUT1Q9H6E5 874 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 NME7Q9Y5B8 376 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CCL15-CCL14A0A0B4J2E2 113 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 TCRBV7S3A2A0A539 114 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CST8O60676 142 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 AKAP5P24588 427 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 NDST1P52848 882 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 TFDP1Q14186 410 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CCNG2Q16589 344 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CCL15Q16663 113 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 MARCH8Q5T0T0 291 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CCDC91Q7Z6B0 441 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 SUGP1Q8IWZ8 645 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 SRRM1Q8IYB3 904 aaKnown RBP15.6■□□□□ 0.09
SF1-211ENST00000448404 CCDC13Q8IYE1 715 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 GPRC5AQ8NFJ5 357 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 ACTL9Q8TC94 416 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 BRI3BPQ8WY22 251 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 HPDLQ96IR7 371 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 CALN1Q9BXU9 219 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 WHRNQ9P202 907 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 KCNG1Q9UIX4 513 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 NR2E3Q9Y5X4 410 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 DOCK3Q8IZD9 2030 aa15.6■□□□□ 0.09
SF1-211ENST00000448404 hCG_1818297A0A087WSY0 165 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 POC1B-GALNT4F8VUJ3 575 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 B4GALT4O60513 344 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 SPAG7O75391 227 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 TTC4O95801 387 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 TFE3P19532 575 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms