RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 MTRRQ9UBK8 725 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 FBXL5Q9UKA1 691 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 DNAJC12Q9UKB3 198 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 BARX2Q9UMQ3 279 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 STXBP5LQ9Y2K9 1186 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 BACE2Q9Y5Z0 518 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 IRAK3Q9Y616 596 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 SCN1AP35498 2009 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 GBF1Q92538 1859 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CDH23Q9H251 3354 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 FSD2A1L4K1 749 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 GOLGA6L3A6NEY3 463 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 OR6C75A6NL08 312 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 HIDE1A8MVS5 230 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 A8MXQ7 604 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 FOXN3O00409 490 aaPredicted RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 EPHB6O15197 1021 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 TEX28O15482 410 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 ADAM12O43184 909 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 HCRTO43612 131 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CILPO75339 1184 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CSPG5O95196 566 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CNPP09543 421 aaKnown RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 RPL17P18621 184 aaKnown RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CD58P19256 250 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 ACO1P21399 889 aaKnown RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 OR1D2P34982 312 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 NDST1P52848 882 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 POLR2FP61218 127 aaKnown RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 YWHAEP62258 255 aaKnown RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CREMQ03060 361 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 INCA1Q0VD86 236 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 PSMD5Q16401 504 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 PLPP4Q5VZY2 271 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 IQCEQ6IPM2 695 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 SLC8B1Q6J4K2 584 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 LRRTM3Q86VH5 581 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 UNC93AQ86WB7 457 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CRYBG2Q8N1P7 616 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 UBR7Q8N806 425 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 OR10T2Q8NGX3 314 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 FAM161BQ96MY7 647 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 KLHL5Q96PQ7 755 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 EMILIN2Q9BXX0 1053 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 STK33Q9BYT3 514 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 ZCWPW1Q9H0M4 648 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 GANQ9H2C0 597 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 LMCD1Q9NZU5 365 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 AJAP1Q9UKB5 411 aaPredicted RBP8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CDH9Q9ULB4 789 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 CNTN6Q9UQ52 1028 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 DAAM1Q9Y4D1 1078 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 NME7Q9Y5B8 376 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 PCDHGC5Q9Y5F6 944 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 FHOD1Q9Y613 1164 aa8.05□□□□□ -1.12
AC004540.1-206ENST00000448056 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ATP2C2O75185 946 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 PTPN1P18031 435 aaKnown RBP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 NDUFV2P19404 249 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TRIM21P19474 475 aaKnown RBP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 RFX1P22670 979 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ACAT1P24752 427 aaKnown RBP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 KLRC2P26717 231 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 PCSK1P29120 753 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 CA8P35219 290 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 NDUFV1P49821 464 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 FXR1P51114 621 aaKnown RBP eCLIP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ZNF75DP51815 510 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 RAD23BP54727 409 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ARPP19P56211 112 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 RAPGEF1Q13905 1077 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 RAB33AQ14088 237 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 DRAP1Q14919 205 aaPredicted RBP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ARHGAP44Q17R89 818 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 FIGNQ5HY92 759 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 SPECC1LQ69YQ0 1117 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 FAM171BQ6P995 826 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TMEM270Q6UE05 265 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 Q7L0L9 218 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ACOT1Q86TX2 421 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 VSTM4Q8IW00 320 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 DEFB123Q8N688 67 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 SLC4A11Q8NBS3 891 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 SHC3Q92529 594 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TMEM176AQ96HP8 235 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 MRFAP1L1Q96HT8 127 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TNIP3Q96KP6 325 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 HEXIM2Q96MH2 286 aaKnown RBP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TWNKQ96RR1 684 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TMEM209Q96SK2 561 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 PKMYT1Q99640 499 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 LPIN3Q9BQK8 851 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 NUP58Q9BVL2 599 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms