RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 VMP1Q96GC9 406 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 UIMC1Q96RL1 719 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 REEP2Q9BRK0 252 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ARHGAP39Q9C0H5 1083 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 TWSG1Q9GZX9 223 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 C11orf54Q9H0W9 315 aaPredicted RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 TP63Q9H3D4 680 aaPredicted RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 CHODLQ9H9P2 273 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 EIF2B3Q9NR50 452 aaKnown RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 SPATA6Q9NWH7 488 aaPredicted RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 HSPBP1Q9NZL4 362 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 SLAMF8Q9P0V8 285 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 RGS17Q9UGC6 210 aaPredicted RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 TMEM59LQ9UK28 342 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CA14Q9ULX7 337 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CYP46A1Q9Y6A2 500 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 hCG_1807616A0A1W2PRN6 198 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 H7C0S8 307 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 GTPBP1O00178 669 aaKnown RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 MASP2O00187 686 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 N4BP3O15049 544 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 GRM6O15303 877 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 TEX33O43247 280 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CYBBP04839 570 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 GRPP07492 148 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CNPP09543 421 aaKnown RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 PORP16435 677 aaPredicted RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 FPR1P21462 350 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 AKT1P31749 480 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CRHR1P34998 444 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 PTPN7P35236 360 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 KCNC1P48547 511 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 UCP3P55916 312 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CDC16Q13042 620 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 IKZF1Q13422 519 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 BECN1Q14457 450 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 STILQ15468 1287 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 GPR68Q15743 365 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 SLC5A9Q2M3M2 681 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 RALGPS1Q5JS13 557 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 HECTD3Q5T447 861 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 FAXCQ5TGI0 409 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 SNX30Q5VWJ9 437 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 MRNIPQ6NTE8 343 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 PAQR3Q6TCH7 311 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 TMC5Q6UXY8 1006 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 LIPIQ6XZB0 460 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 KRT74Q7RTS7 529 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 ANKS1BQ7Z6G8 1248 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CPLX4Q7Z7G2 160 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 VSIG1Q86XK7 387 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 RPAP2Q8IXW5 612 aaPredicted RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 REPS2Q8NFH8 660 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 SSH3Q8TE77 659 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 SMCR8Q8TEV9 937 aaPredicted RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 CREB3L4Q8TEY5 395 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 TBC1D22AQ8WUA7 517 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 RAPGEF4Q8WZA2 1011 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 YME1L1Q96TA2 773 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 PACSIN1Q9BY11 444 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 MS4A7Q9GZW8 240 aaPredicted RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 BRD8Q9H0E9 1235 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 ABHD16BQ9H3Z7 469 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 PRDM13Q9H4Q3 707 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 EPS8L2Q9H6S3 715 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 SYNCQ9H7C4 482 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CARS2Q9HA77 564 aaKnown RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 GPRC5DQ9NZD1 345 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 LMCD1Q9NZU5 365 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 ARHGAP20Q9P2F6 1191 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 RPS6KA6Q9UK32 745 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 ACAD8Q9UKU7 415 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 ZHX1Q9UKY1 873 aaPredicted RBP4.27□□□□□ -1.73
PMS1-216ENST00000447734 DERAQ9Y315 318 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 PLEKHM1Q9Y4G2 1056 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 DTNAQ9Y4J8 743 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 ACTL7AQ9Y615 435 aa4.27□□□□□ -1.73
PMS1-216ENST00000447734 CCDC78A2IDD5 438 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 SMTNL1A8MU46 457 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 E7EVH7 732 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 PCDH17O14917 1159 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 KIAA0355O15063 1070 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 TSPAN3O60637 253 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 COQ9O75208 318 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 ITGA10O75578 1167 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 GASTP01350 101 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 PRNPP04156 253 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 GJB1P08034 283 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 SBK3P0C264 359 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 SRGAP2BP0DMP2 458 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 MTHFD1P11586 935 aaKnown RBP4.26□□□□□ -1.73
PMS1-216ENST00000447734 CKBP12277 381 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 IL2RBP14784 551 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 TPH1P17752 444 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 ATICP31939 592 aa4.26□□□□□ -1.73
PMS1-216ENST00000447734 ARL3P36405 182 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms