RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 TCEAL4Q96EI5 215 aa13.46□□□□□ -0.25
SSR4-205ENST00000447375 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
SSR4-205ENST00000447375 ZSWIM3Q96MP5 696 aa13.46□□□□□ -0.25
SSR4-205ENST00000447375 UROC1Q96N76 676 aa13.46□□□□□ -0.25
SSR4-205ENST00000447375 CORO1BQ9BR76 489 aa13.46□□□□□ -0.25
SSR4-205ENST00000447375 SLC39A2Q9NP94 309 aa13.46□□□□□ -0.25
SSR4-205ENST00000447375 UBE4BO95155 1302 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 TMEM189-UBE2V1I3L0A0 370 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 ZNF197O14709 1029 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 MICAL2O94851 1124 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 KIF4AO95239 1232 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 LRG1P02750 347 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 VIPR2P41587 438 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
SSR4-205ENST00000447375 CLCNKBP51801 687 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
SSR4-205ENST00000447375 SNRPFP62306 86 aaKnown RBP13.45□□□□□ -0.26
SSR4-205ENST00000447375 PPP2R3AQ06190 1150 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 STK4Q13043 487 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 CD300LGQ6UXG3 332 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 C18orf25Q96B23 403 aaPredicted RBP13.45□□□□□ -0.26
SSR4-205ENST00000447375 CCDC34Q96HJ3 373 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 TIGD1Q96MW7 591 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 CBWD1Q9BRT8 395 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 C8orf33Q9H7E9 229 aaPredicted RBP13.45□□□□□ -0.26
SSR4-205ENST00000447375 EXOC1Q9NV70 894 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.45□□□□□ -0.26
SSR4-205ENST00000447375 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 F5P12259 2224 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
SSR4-205ENST00000447375 ARNTLO00327 626 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 KIAA0391O15091 583 aaKnown RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 GADD45BO75293 160 aaPredicted RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 B3GAT3O94766 335 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 LDHAP00338 332 aaKnown RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 CYP3A5P20815 502 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 CSRP1P21291 193 aaKnown RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 SOX9P48436 509 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 KCNB1Q14721 858 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 PDZD4Q76G19 769 aaPredicted RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 MFSD6LQ8IWD5 586 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 ELOA2Q8IYF1 753 aaPredicted RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 ZC3H10Q96K80 434 aaKnown RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 ASB7Q9H672 318 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 MTRRQ9UBK8 725 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 DERAQ9Y315 318 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 NEUROG3Q9Y4Z2 214 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 LAMA1P25391 3075 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 COL4A2P08572 1712 aa13.44□□□□□ -0.26
SSR4-205ENST00000447375 SETXQ7Z333 2677 aaKnown RBP13.44□□□□□ -0.26
SSR4-205ENST00000447375 DMXL2Q8TDJ6 3036 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 CCDC163A0A0D9SF12 145 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 ARHGEF37A1IGU5 675 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 EXTL3O43909 919 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 AKAP3O75969 853 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 ELF1P32519 619 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 CCR2P41597 374 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 SPAG1Q07617 926 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 KNOP1Q1ED39 458 aaKnown RBP13.43□□□□□ -0.26
SSR4-205ENST00000447375 CYP4A22Q5TCH4 519 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 SPATA1Q5VX52 437 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 KIAA1211LQ6NV74 962 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 ARMCX5Q6P1M9 558 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 C19orf48Q6RUI8 117 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.43□□□□□ -0.26
SSR4-205ENST00000447375 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 NELFCDQ8IXH7 590 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 YAF2Q8IY57 180 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 SYNPOQ8N3V7 929 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 CCDC47Q96A33 483 aaKnown RBP13.43□□□□□ -0.26
SSR4-205ENST00000447375 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 FAM213AQ9BRX8 229 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 PCIF1Q9H4Z3 704 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 AGPAT3Q9NRZ7 376 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 CGNQ9P2M7 1197 aaKnown RBP13.43□□□□□ -0.26
SSR4-205ENST00000447375 UBQLN1Q9UMX0 589 aaKnown RBP13.43□□□□□ -0.26
SSR4-205ENST00000447375 TICRRQ7Z2Z1 1910 aa13.43□□□□□ -0.26
SSR4-205ENST00000447375 IGF2RP11717 2491 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 MYBPHLA2RUH7 354 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 HEPACAM2A8MVW5 462 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 SPECC1L-ADORA2AF8WAN1 911 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 PODXLO00592 558 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 PRRG1O14668 218 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 XPOTO43592 962 aaKnown RBP13.42□□□□□ -0.26
SSR4-205ENST00000447375 TRAPPC3O43617 180 aa13.42□□□□□ -0.26
SSR4-205ENST00000447375 HYAL3O43820 417 aaPredicted RBP13.42□□□□□ -0.26
SSR4-205ENST00000447375 IL18RAPO95256 599 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms