RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TAF1BQ53T94 588 aaPredicted RBP20.07■□□□□ 0.8
SDCBP-204ENST00000447182 TEX9Q8N6V9 391 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 OR5B17Q8NGF7 314 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 ZBTB45Q96K62 511 aaPredicted RBP20.07■□□□□ 0.8
SDCBP-204ENST00000447182 ACSS3Q9H6R3 686 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 ANKFY1Q9P2R3 1169 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
SDCBP-204ENST00000447182 FER1L6Q2WGJ9 1857 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 ADGRA2Q96PE1 1338 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 C3orf70A6NLC5 250 aaPredicted RBP20.06■□□□□ 0.8
SDCBP-204ENST00000447182 IFNB1P01574 187 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 TROVE2P10155 538 aaKnown RBP eCLIP20.06■□□□□ 0.8
SDCBP-204ENST00000447182 EPHB2P29323 1055 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 CDH5P33151 784 aaPredicted RBP20.06■□□□□ 0.8
SDCBP-204ENST00000447182 NAMPTP43490 491 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ARL4CP56559 192 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ACTR2P61160 394 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 PLCB3Q01970 1234 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 RNASELQ05823 741 aaKnown RBP20.06■□□□□ 0.8
SDCBP-204ENST00000447182 MAPK6Q16659 721 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 KLHL38Q2WGJ6 581 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ZNF449Q6P9G9 518 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 CLNKQ7Z7G1 428 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ANKMY2Q8IV38 441 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 NAT8LQ8N9F0 302 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 FBXO41Q8TF61 875 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 PYROXD1Q8WU10 500 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 HAUS1Q96CS2 278 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ZBED3Q96IU2 234 aaPredicted RBP20.06■□□□□ 0.8
SDCBP-204ENST00000447182 MSTO1Q9BUK6 570 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 VPS11Q9H270 941 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 RNF146Q9NTX7 359 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 GINM1Q9NU53 330 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ZNRF3Q9ULT6 936 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 TELO2Q9Y4R8 837 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 DOCK5Q9H7D0 1870 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 VWA5AO00534 786 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 CTCFP49711 727 aaPredicted RBP20.06■□□□□ 0.8
SDCBP-204ENST00000447182 DGKZQ13574 1117 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 TFDP1Q14186 410 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 PLEKHG4Q58EX7 1191 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 ZBTB41Q5SVQ8 909 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 TMEM35BQ8NCS4 154 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 KCNV2Q8TDN2 545 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 CPT1BQ92523 772 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 CDHR1Q96JP9 859 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 NUDCD1Q96RS6 583 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 IMPG2Q9BZV3 1241 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 PORCNQ9H237 461 aa20.06■□□□□ 0.8
SDCBP-204ENST00000447182 PARP14Q460N5 1801 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 K7ERI5 159 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 SMAPO00193 183 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 BANF1O75531 89 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 NEBLO76041 1014 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 ASS1P00966 412 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 TSHRP16473 764 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 ADRA1DP25100 572 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 ABL2P42684 1182 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 AP3M2P53677 418 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 RAD23BP54727 409 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 BANPQ8N9N5 519 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 ASAP3Q8TDY4 903 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 MRRFQ96E11 262 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 PAFAH2Q99487 392 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 QTRT2Q9H974 415 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 NPHS2Q9NP85 383 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 LMNAP02545 664 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 SSTR1P30872 391 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 FNBP1LQ5T0N5 605 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 SMYD5Q6GMV2 418 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 MTDHQ86UE4 582 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 TTC13Q8NBP0 860 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 NSUN6Q8TEA1 469 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 SPDL1Q96EA4 605 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 TUBB6Q9BUF5 446 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 DENND2DQ9H6A0 471 aaPredicted RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 DHX33Q9H6R0 707 aaKnown RBP20.05■□□□□ 0.8
SDCBP-204ENST00000447182 RIPK3Q9Y572 518 aa20.05■□□□□ 0.8
SDCBP-204ENST00000447182 GOLGA8SH3BPF8 625 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 GOLGA8MH3BSY2 632 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 EIF4BP23588 611 aaKnown RBP20.04■□□□□ 0.8
SDCBP-204ENST00000447182 MARK3P27448 753 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 RXRBP28702 533 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 ARL2P36404 184 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 MSS51Q4VC12 460 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 ANKRD22Q5VYY1 191 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 CAPRIN2Q6IMN6 1127 aaKnown RBP20.04■□□□□ 0.8
SDCBP-204ENST00000447182 C3orf62Q6ZUJ4 267 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 AGBL3Q8NEM8 1001 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 DEPTORQ8TB45 409 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 TCP10LQ8TDR4 215 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 DCAKDQ8WVC6 231 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 TMEM143Q96AN5 459 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 ACSF2Q96CM8 615 aaPredicted RBP20.04■□□□□ 0.8
SDCBP-204ENST00000447182 TARS2Q9BW92 718 aaKnown RBP20.04■□□□□ 0.8
SDCBP-204ENST00000447182 RPAP3Q9H6T3 665 aaPredicted RBP20.04■□□□□ 0.8
SDCBP-204ENST00000447182 KANSL3Q9P2N6 904 aa20.04■□□□□ 0.8
SDCBP-204ENST00000447182 PCDHGC3Q9UN70 934 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms