RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RHOT1	Q8IXI2	618 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	THNSL1	Q8IYQ7	743 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	TTLL6	Q8N841	843 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	PDCD7	Q8N8D1	485 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	MAGEC3	Q8TD91	643 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	SYT15	Q9BQS2	421 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	TMEM8A	Q9HCN3	771 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	UVRAG	Q9P2Y5	699 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	MYPN	Q86TC9	1320 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	DHX15	O43143	795 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CST8	O60676	142 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	STK10	O94804	968 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	PTK6	Q13882	451 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	LIN9	Q5TKA1	542 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	MFSD5	Q6N075	450 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	SCYL2	Q6P3W7	929 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	C15orf52	Q6ZUT6	534 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	HACE1	Q8IYU2	909 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	FBXO36	Q8NEA4	188 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	WDR60	Q8WVS4	1066 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	P3H4	Q92791	437 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	FAM161B	Q96MY7	647 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	C2CD2	Q9Y426	696 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	MAST2	Q6P0Q8	1798 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ZNF541	Q9H0D2	1346 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	CAPN9	O14815	690 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	GYG2	O15488	501 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	PFDN1	O60925	122 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	NR1H3	Q13133	447 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	PPM1N	Q8N819	430 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	ACTL9	Q8TC94	416 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	MIPEP	Q99797	713 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	AGO4	Q9HCK5	861 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	TXLNG	Q9NUQ3	528 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	IL1RAPL1	Q9NZN1	696 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	SLC17A6	Q9P2U8	582 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	TAF1L	Q8IZX4	1826 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	SRRM3	A6NNA2	597 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	YDJC	A8MPS7	323 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	UGT1A9	O60656	530 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	PROSC	O94903	275 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	ANXA13	P27216	316 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	THOC5	Q13769	683 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	SH3PXD2A	Q5TCZ1	1133 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	ANO7	Q6IWH7	933 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	RNF168	Q8IYW5	571 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	POU5F2	Q8N7G0	328 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	GRK7	Q8WTQ7	553 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	AKT1S1	Q96B36	256 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	UGT1A7	Q9HAW7	530 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	UGT1A10	Q9HAW8	530 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	UGT1A8	Q9HAW9	530 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	FBXO40	Q9UH90	709 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312		H3BRJ5	948 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	ASMTL	O95671	621 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	ETS2	P15036	469 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	ALDH18A1	P54886	795 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	DNAJC24	Q6P3W2	148 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	IGDCC3	Q8IVU1	814 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	CERK	Q8TCT0	537 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	RSAD2	Q8WXG1	361 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	CFAP57	Q96MR6	1250 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	TSPAN18	Q96SJ8	248 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	MMP19	Q99542	508 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	HEY1	Q9Y5J3	304 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	USH1C	Q9Y6N9	552 aa		13.17	□□□□□ -0.3
DDR1-238	ENST00000446312	CDK5RAP2	Q96SN8	1893 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	GLRA2	P23416	452 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	OTUD4	Q01804	1114 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	FSTL1	Q12841	308 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	CYP1B1	Q16678	543 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	RFX6	Q8HWS3	928 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	RILP	Q96NA2	401 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	PAFAH2	Q99487	392 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	EHMT1	Q9H9B1	1298 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	RNPEPL1	Q9HAU8	725 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	CYP4F11	Q9HBI6	524 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	RBAK	Q9NYW8	714 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	PRKAG3	Q9UGI9	489 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	IKBKG	Q9Y6K9	419 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	LUC7L3	O95232	432 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	TPBGL	P0DKB5	382 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	DLK2	Q6UY11	383 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	PODN	Q7Z5L7	613 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	CCNJL	Q8IV13	435 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	UNC45B	Q8IWX7	931 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	GPD1L	Q8N335	351 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	PHC3	Q8NDX5	983 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	GMCL1P1	Q8NEA9	526 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	CFAP61	Q8NHU2	1237 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	ATXN7L3B	Q96GX2	97 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	MSTO1	Q9BUK6	570 aa		13.16	□□□□□ -0.3

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