RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SRGAP2BP0DMP2 458 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 UCHL3P15374 230 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 FGFR3P22607 806 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
LIME1-202ENST00000444951 ACAT1P24752 427 aaKnown RBP18.37■□□□□ 0.53
LIME1-202ENST00000444951 PBX1P40424 430 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 GLUD2P49448 558 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 CDR1P51861 262 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 YWHAHQ04917 246 aaPredicted RBP18.37■□□□□ 0.53
LIME1-202ENST00000444951 VARS2Q5ST30 1063 aaKnown RBP18.37■□□□□ 0.53
LIME1-202ENST00000444951 IER5LQ5T953 404 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 TMC6Q7Z403 805 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 DRC7Q8IY82 874 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 C12orf76Q8N812 135 aaPredicted RBP18.37■□□□□ 0.53
LIME1-202ENST00000444951 KBTBD7Q8WVZ9 684 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 POMKQ9H5K3 350 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 CYP3A43Q9HB55 503 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 CISHQ9NSE2 258 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 PCDHB4Q9Y5E5 795 aa18.37■□□□□ 0.53
LIME1-202ENST00000444951 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.36■□□□□ 0.53
LIME1-202ENST00000444951 A8MXQ7 604 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 EFEMP2O95967 443 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
LIME1-202ENST00000444951 KRT5P13647 590 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 EPCAMP16422 314 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 RPL17P18621 184 aaKnown RBP18.36■□□□□ 0.53
LIME1-202ENST00000444951 TYMPP19971 482 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 LMO2P25791 158 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 GNL1P36915 607 aaPredicted RBP18.36■□□□□ 0.53
LIME1-202ENST00000444951 MRE11P49959 708 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 ARPP19P56211 112 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 GCNT1Q02742 428 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 CTXN3Q4LDR2 81 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 ZNF394Q53GI3 561 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 DPH6Q7L8W6 267 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 BMP8AQ7Z5Y6 402 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 GLYCTKQ8IVS8 523 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 VSTM4Q8IW00 320 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 THEM5Q8N1Q8 247 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 TMEM86AQ8N2M4 240 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 PRSS33Q8NF86 280 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 CASP10Q92851 521 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 ASIC4Q96FT7 647 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 DDX43Q9NXZ2 648 aaKnown RBP18.36■□□□□ 0.53
LIME1-202ENST00000444951 HMGXB4Q9UGU5 601 aa18.36■□□□□ 0.53
LIME1-202ENST00000444951 TACC1O75410 805 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 CYP11A1P05108 521 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
LIME1-202ENST00000444951 WARSP23381 471 aaKnown RBP18.35■□□□□ 0.53
LIME1-202ENST00000444951 NDST1P52848 882 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 YWHAEP62258 255 aaKnown RBP18.35■□□□□ 0.53
LIME1-202ENST00000444951 DRAP1Q14919 205 aaPredicted RBP18.35■□□□□ 0.53
LIME1-202ENST00000444951 PSMD5Q16401 504 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 SPECC1LQ69YQ0 1117 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 ENOSF1Q7L5Y1 443 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 LIMS2Q7Z4I7 341 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 RNF168Q8IYW5 571 aaPredicted RBP18.35■□□□□ 0.53
LIME1-202ENST00000444951 PBXIP1Q96AQ6 731 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 MRFAP1L1Q96HT8 127 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 SPAG5Q96R06 1193 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 MRPL17Q9NRX2 175 aaKnown RBP18.35■□□□□ 0.53
LIME1-202ENST00000444951 CHST7Q9NS84 486 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 TSC2P49815 1807 aa18.35■□□□□ 0.53
LIME1-202ENST00000444951 VWA8A3KMH1 1905 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 C2CD4DB7Z1M9 353 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 H7C4K7 107 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 CTSAP10619 480 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 LHX1P48742 406 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
LIME1-202ENST00000444951 DSG1Q02413 1049 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 RARS2Q5T160 578 aaKnown RBP18.34■□□□□ 0.53
LIME1-202ENST00000444951 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 ZNF280DQ6N043 979 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 TMEM270Q6UE05 265 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 ANKS3Q6ZW76 656 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 LNX1Q8TBB1 728 aaPredicted RBP18.34■□□□□ 0.53
LIME1-202ENST00000444951 SLC22A17Q8WUG5 538 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 TMEM209Q96SK2 561 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 PHOX2BQ99453 314 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 LPIN3Q9BQK8 851 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 ADAM7Q9H2U9 754 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 CEP72Q9P209 647 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 STK39Q9UEW8 545 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 NME7Q9Y5B8 376 aa18.34■□□□□ 0.53
LIME1-202ENST00000444951 ITIH6Q6UXX5 1313 aa18.33■□□□□ 0.53
LIME1-202ENST00000444951 FOXN3O00409 490 aaPredicted RBP18.33■□□□□ 0.52
LIME1-202ENST00000444951 ATP2C2O75185 946 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 CALCAP01258 141 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 OR4Q2P0C623 313 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 ACO1P21399 889 aaKnown RBP18.33■□□□□ 0.52
LIME1-202ENST00000444951 RFX1P22670 979 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 SIGLEC14Q08ET2 396 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 BMS1Q14692 1282 aaKnown RBP18.33■□□□□ 0.52
LIME1-202ENST00000444951 PTPN14Q15678 1187 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 ACOT1Q86TX2 421 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 SPC24Q8NBT2 197 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms