RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MFAP3P55082 362 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 PSMC1P62191 440 aaKnown RBP15.03■□□□□ -0
SSBP3-208ENST00000444533 RPL10AP62906 217 aaKnown RBP15.03■□□□□ -0
SSBP3-208ENST00000444533 DLX2Q07687 328 aaPredicted RBP15.03■□□□□ -0
SSBP3-208ENST00000444533 DUSP4Q13115 394 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 CUL2Q13617 745 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 ITIH5Q86UX2 942 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 OSTM1Q86WC4 334 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.03■□□□□ -0
SSBP3-208ENST00000444533 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 FUBP3Q96I24 572 aaKnown RBP eCLIP15.03■□□□□ -0
SSBP3-208ENST00000444533 MSLNLQ96KJ4 702 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 ZNF512Q96ME7 567 aaPredicted RBP15.03■□□□□ -0
SSBP3-208ENST00000444533 TMEM209Q96SK2 561 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 RTP3Q9BQQ7 232 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 MED10Q9BTT4 135 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 FUCA2Q9BTY2 467 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 PRKD2Q9BZL6 878 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 VPS16Q9H269 839 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 APOBEC3GQ9HC16 384 aaKnown RBP15.03■□□□□ -0
SSBP3-208ENST00000444533 TAB2Q9NYJ8 693 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 GTF3C4Q9UKN8 822 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 INSL5Q9Y5Q6 135 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 ANXA13P27216 316 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 TFF2Q03403 129 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 INCA1Q0VD86 236 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 TWF1Q12792 350 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 CBX2Q14781 532 aaPredicted RBP15.02■□□□□ -0
SSBP3-208ENST00000444533 KRT31Q15323 416 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 MDH1BQ5I0G3 518 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 SYCE2Q6PIF2 218 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 LRSAM1Q6UWE0 723 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 GPR149Q86SP6 731 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 C12orf76Q8N812 135 aaPredicted RBP15.02■□□□□ -0
SSBP3-208ENST00000444533 ATAD1Q8NBU5 361 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 MYCBPAPQ8TBZ2 947 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 TATDN2Q93075 761 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 ELMO3Q96BJ8 720 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 PCMTD1Q96MG8 357 aaPredicted RBP15.02■□□□□ -0
SSBP3-208ENST00000444533 ASB2Q96Q27 587 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 CRACR2AQ9BSW2 395 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 RHOBTB2Q9BYZ6 727 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 PRDM6Q9NQX0 595 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 CISHQ9NSE2 258 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 USP15Q9Y4E8 981 aaPredicted RBP15.02■□□□□ -0
SSBP3-208ENST00000444533 ASB3Q9Y575 518 aa15.02■□□□□ -0
SSBP3-208ENST00000444533 CCL16O15467 120 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 MBTPS2O43462 519 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 RFPL2O75678 378 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 SERPINC1P01008 464 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 POU2F2P09086 479 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 SLC8A3P57103 927 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 GCNT1Q02742 428 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 CFAP221Q4G0U5 840 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 FAM171BQ6P995 826 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 TRIM65Q6PJ69 517 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 VSTM1Q6UX27 236 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 ACOT1Q86TX2 421 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 DHX40Q8IX18 779 aaKnown RBP15.01□□□□□ -0.01
SSBP3-208ENST00000444533 LEMD2Q8NC56 503 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 JAKMIP2Q96AA8 810 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 HEXIM2Q96MH2 286 aaKnown RBP15.01□□□□□ -0.01
SSBP3-208ENST00000444533 ELOVL4Q9GZR5 314 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 CBX8Q9HC52 389 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 UBE2TQ9NPD8 197 aaPredicted RBP15.01□□□□□ -0.01
SSBP3-208ENST00000444533 EHD2Q9NZN4 543 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 APEX2Q9UBZ4 518 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 LIMA1Q9UHB6 759 aaKnown RBP15.01□□□□□ -0.01
SSBP3-208ENST00000444533 SLC27A5Q9Y2P5 690 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 YIPF1Q9Y548 306 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 TSC2P49815 1807 aa15.01□□□□□ -0.01
SSBP3-208ENST00000444533 MYBPHLA2RUH7 354 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 GRXCR2A6NFK2 248 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 TRIM66O15016 1216 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 ATP2C2O75185 946 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 CILPO75339 1184 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 SLC34A2O95436 690 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 SEC24AO95486 1093 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 FGF19O95750 216 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 TPM3P06753 285 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 PTPN2P17706 415 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 RFX1P22670 979 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 GRIK1P39086 918 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 COPB1P53618 953 aaKnown RBP15□□□□□ -0.01
SSBP3-208ENST00000444533 UBXN1Q04323 297 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 ZNF394Q53GI3 561 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 MIIPQ5JXC2 388 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 CYP4A22Q5TCH4 519 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 LRRTM3Q86VH5 581 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 SCN4BQ8IWT1 228 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 CRYBG2Q8N1P7 616 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 GADD45GIP1Q8TAE8 222 aaPredicted RBP15□□□□□ -0.01
SSBP3-208ENST00000444533 MYLPFQ96A32 169 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 PCED1BQ96HM7 432 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 GCNAQ96QF7 691 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 SDCBP2Q9H190 292 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 S1PR5Q9H228 398 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 ASAH2Q9NR71 780 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 NR2E1Q9Y466 385 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms