RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NT5C3BQ969T7 300 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF653Q96CK0 615 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 LRRC45Q96CN5 670 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CYFIP2Q96F07 1278 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PGAP3Q96FM1 320 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KIF12Q96FN5 646 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 FUBP3Q96I24 572 aaKnown RBP eCLIP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RNPC3Q96LT9 517 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SCLT1Q96NL6 688 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PPP1R10Q96QC0 940 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 MMS19Q96T76 1030 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PCDHB18PQ96TA0 734 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 HNRNPABQ99729 332 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ACBD6Q9BR61 282 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CNPY3Q9BT09 278 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 NUP85Q9BW27 656 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PARD6BQ9BYG5 372 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 THAP2Q9H0W7 228 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TSPYL2Q9H2G4 693 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 IKZF4Q9H2S9 585 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RSAD1Q9HA92 442 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SLC24A3Q9HC58 644 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CSNK1G1Q9HCP0 422 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 POLD4Q9HCU8 107 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ERVK-5Q9HDB9 667 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PAK6Q9NQU5 681 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CNGB3Q9NQW8 809 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RGS18Q9NS28 235 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 FAM105AQ9NUU6 356 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RNF186Q9NXI6 227 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PSD3Q9NYI0 1048 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 WHRNQ9P202 907 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 FNIP2Q9P278 1114 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 HESX1Q9UBX0 185 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 FETUBQ9UGM5 382 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 AJAP1Q9UKB5 411 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 OGDHLQ9ULD0 1010 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 AGAP1Q9UPQ3 857 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 UTP11Q9Y3A2 253 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 IPPQ9Y573 584 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PTCH2Q9Y6C5 1203 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SF3B1O75533 1304 aaKnown RBP eCLIP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TRIP12Q14669 1992 aaPredicted RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TRIP11Q15643 1979 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TDRD15B5MCY1 1934 aaKnown RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 CFAP69A5D8W1 941 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TTLL13PA6NNM8 815 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TMCO5BA8MYB1 307 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 ARVCFO00192 962 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 AP3B1O00203 1094 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PDE2AO00408 941 aaPredicted RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 KRIT1O00522 736 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 ENC1O14682 589 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 XPO1O14980 1071 aaKnown RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 SYN3O14994 580 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 EIF3HO15372 352 aaKnown RBP eCLIP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 NCAM2O15394 837 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 B4GALT5O43286 388 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 BUB1O43683 1085 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 OPA1O60313 960 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PEX10O60683 326 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 F9P00740 461 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 FGGP02679 453 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 CHRNA1P02708 482 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 CXCL10P02778 98 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 ITGAVP06756 1048 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PFKMP08237 780 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 NFICP08651 508 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 ITGA4P13612 1032 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PRKAR2AP13861 404 aaKnown RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TSHRP16473 764 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 COMTP21964 271 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 RRM1P23921 792 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 DNAJB2P25686 324 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 CTGFP29279 349 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 GRK4P32298 578 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 NOS2P35228 1153 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 GNL1P36915 607 aaPredicted RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 USP8P40818 1118 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 HCAR3P49019 387 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PSEN1P49768 467 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 SCNN1GP51170 649 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 CLCN6P51797 869 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 WNT7BP56706 349 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 IGBP1P78318 339 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 CDK16Q00536 496 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 SLC6A3Q01959 620 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PRKCZQ05513 592 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 BST2Q10589 180 aaKnown RBP2.98□□□□□ -1.93
LINC00393-201ENST00000443621 PDCLQ13371 301 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 XRCC4Q13426 336 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TUSC3Q13454 348 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 TFDP2Q14188 446 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 SLMAPQ14BN4 828 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 ELF2Q15723 593 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 KCNA10Q16322 511 aa2.98□□□□□ -1.93
LINC00393-201ENST00000443621 NFE2Q16621 373 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms