RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 MYADMQ96S97 322 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 MMS19Q96T76 1030 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 PHF7Q9BWX1 381 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 OXCT2Q9BYC2 517 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 NIF3L1Q9GZT8 377 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 METTL14Q9HCE5 456 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 WDR6Q9NNW5 1121 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 NCANO14594 1321 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 FAM163BP0C2L3 166 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 HAPLN1P10915 354 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 MTHFRP42898 656 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 LHX1P48742 406 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 TNNC1P63316 161 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 MYL7Q01449 175 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 KCNH2Q12809 1159 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 LIN9Q5TKA1 542 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 SDHAF4Q5VUM1 108 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 TAF4BQ92750 862 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 TCEAL4Q96EI5 215 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 PCED1BQ96HM7 432 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 UHRF1Q96T88 793 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 ELOVL4Q9GZR5 314 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 AJAP1Q9UKB5 411 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 CDH9Q9ULB4 789 aa13.73□□□□□ -0.21
PDLIM2-212ENST00000443561 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 CLDN5O00501 218 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 PRRG1O14668 218 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 CILPO75339 1184 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 CYP2F1P24903 491 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 NDST1P52848 882 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 EPHA5P54756 1037 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 MTMR3Q13615 1198 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 STX1AQ16623 288 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 MDH1BQ5I0G3 518 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 APTXQ7Z2E3 356 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 TMEM150AQ86TG1 271 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 OR6B3Q8NGW1 331 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 ENOX1Q8TC92 643 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 GPR152Q8TDT2 470 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 ZNF518BQ9C0D4 1074 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
PDLIM2-212ENST00000443561 TRIOO75962 3097 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 TADA3O75528 432 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 GNA14O95837 355 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 RHOP08100 348 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 HMGA1P17096 107 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 CEBPBP17676 345 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 PTPN1P18031 435 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 PCSK1P29120 753 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 CFAP221Q4G0U5 840 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 ATAT1Q5SQI0 421 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 CES5AQ6NT32 575 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 CYP26C1Q6V0L0 522 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 ACOT1Q86TX2 421 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 B3GALNT2Q8NCR0 500 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 ZMIZ2Q8NF64 920 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 SPPL2BQ8TCT7 592 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 KREMEN1Q96MU8 473 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 NECTIN4Q96NY8 510 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 SIX2Q9NPC8 291 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 HSFX1Q9UBD0 423 aa13.71□□□□□ -0.21
PDLIM2-212ENST00000443561 A8MXQ7 604 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 STX10O60499 249 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 CALCAP01258 141 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 CCDC130P13994 396 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 ZNF18P17022 549 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 GJA1P17302 382 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 TSPY1Q01534 308 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 LRMPQ12912 555 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 DDR2Q16832 855 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 CT47A1Q5JQC4 288 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 GJB7Q6PEY0 223 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 FAM35AQ86V20 835 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 NPAS3Q8IXF0 933 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 DCP1BQ8IZD4 617 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 FUKQ8N0W3 1084 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 CRYBG2Q8N1P7 616 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms