RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 LMBRD2Q68DH5 695 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-203ENST00000443016 UNC13DQ70J99 1090 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 DNAJB7Q7Z6W7 309 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-203ENST00000443016 TTC9BQ8N6N2 239 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 FAM84AQ96KN4 292 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 SPACA7Q96KW9 195 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 FNBP1Q96RU3 617 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 C7orf25Q9BPX7 421 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 KIAA1586Q9HCI6 787 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
USP6NL-203ENST00000443016 KANSL1LA0AUZ9 987 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 VNN2O95498 520 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 MYL1P05976 194 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.9
USP6NL-203ENST00000443016 PSMC3P17980 439 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 TNNI1P19237 187 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 GABRR2P28476 465 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 VIPR2P41587 438 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 STARD6P59095 220 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 PRKCQQ04759 706 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 SMARCB1Q12824 385 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 SURF1Q15526 300 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 DUOXA2Q1HG44 320 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 CBWD2Q8IUF1 395 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 LRRC52Q8N7C0 313 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 PJA1Q8NG27 643 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 SPPL2BQ8TCT7 592 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 IRF7Q92985 503 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 PSMG2Q969U7 264 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 GCNAQ96QF7 691 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 DNAJC25Q9H1X3 360 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 PIF1Q9H611 641 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 SLC39A2Q9NP94 309 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 HEBP1Q9NRV9 189 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 DDX43Q9NXZ2 648 aaKnown RBP9.4□□□□□ -0.9
USP6NL-203ENST00000443016 HSFX1Q9UBD0 423 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 SCN1AP35498 2009 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 GVINP1Q7Z2Y8 2422 aa9.4□□□□□ -0.9
USP6NL-203ENST00000443016 SPTBN4Q9H254 2564 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 NOTCH4Q99466 2003 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 CLIC2O15247 247 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 GFRA3O60609 400 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 GDI1P31150 447 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 CYP2J2P51589 502 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 EPHA5P54756 1037 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 MYL7Q01449 175 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.91
USP6NL-203ENST00000443016 NFE2Q16621 373 aaPredicted RBP9.4□□□□□ -0.91
USP6NL-203ENST00000443016 ARHGAP15Q53QZ3 475 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 TPRG1Q6ZUI0 275 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 YAF2Q8IY57 180 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 ELOA2Q8IYF1 753 aaPredicted RBP9.4□□□□□ -0.91
USP6NL-203ENST00000443016 PDCL2Q8N4E4 241 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 SHKBP1Q8TBC3 707 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 ZNF507Q8TCN5 953 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 C2orf15Q8WU43 125 aaKnown RBP9.4□□□□□ -0.91
USP6NL-203ENST00000443016 CCDC47Q96A33 483 aaKnown RBP9.4□□□□□ -0.91
USP6NL-203ENST00000443016 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 BORCS6Q96GS4 357 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 BCO2Q9BYV7 579 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 AGPAT3Q9NRZ7 376 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 INTS13Q9NVM9 706 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 PCDHB5Q9Y5E4 795 aa9.4□□□□□ -0.91
USP6NL-203ENST00000443016 PVALEFA0A1B0GWK0 134 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 FAM170BA6NMN3 283 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
USP6NL-203ENST00000443016 SMC2O95347 1197 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 FGF19O95750 216 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-203ENST00000443016 CUL4BQ13620 913 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 EGFLAMQ63HQ2 1017 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 CNNM4Q6P4Q7 775 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 POTEHQ6S545 545 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 ZNF852Q6ZMS4 543 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 LRRTM3Q86VH5 581 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 GRAMD1CQ8IYS0 662 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 TMEM86AQ8N2M4 240 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 XXYLT1Q8NBI6 393 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 SCFD1Q8WVM8 642 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 HPDLQ96IR7 371 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 LPIN3Q9BQK8 851 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 PI4K2AQ9BTU6 479 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 L1RE1Q9UN81 338 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 MRPS17Q9Y2R5 130 aaKnown RBP9.39□□□□□ -0.91
USP6NL-203ENST00000443016 ZNF263O14978 683 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 NCAM2O15394 837 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 LRRN2O75325 713 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 MOSPD3O75425 235 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 FCARP24071 287 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 ACAT1P24752 427 aaKnown RBP9.39□□□□□ -0.91
USP6NL-203ENST00000443016 HOXD13P35453 343 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 STXBP5Q5T5C0 1151 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 GPR158Q5T848 1215 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 EPM2AIP1Q7L775 607 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-203ENST00000443016 FRMD5Q7Z6J6 570 aa9.39□□□□□ -0.91
USP6NL-203ENST00000443016 TMC8Q8IU68 726 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms