RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 FAM171BQ6P995 826 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 SPPL2BQ8TCT7 592 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 FAXDC2Q96IV6 333 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 LPIN3Q9BQK8 851 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 FUCA2Q9BTY2 467 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 CRISPLD1Q9H336 500 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 DPEP3Q9H4B8 488 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 CRTAC1Q9NQ79 661 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 ABI2Q9NYB9 513 aaPredicted RBP13.16□□□□□ -0.3
USP1-203ENST00000442679 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 SOAT2O75908 522 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 POU2F2P09086 479 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 CD58P19256 250 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 ALDH1A3P47895 512 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 NDST1P52848 882 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 PLD1Q13393 1074 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 MAPRE1Q15691 268 aaKnown RBP13.15□□□□□ -0.3
USP1-203ENST00000442679 CCDC142Q17RM4 750 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 CDKAL1Q5VV42 579 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 C4orf50Q6ZRC1 276 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 SPATA2LQ8IUW3 424 aaPredicted RBP13.15□□□□□ -0.3
USP1-203ENST00000442679 AOPEPQ8N6M6 819 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 TTC9BQ8N6N2 239 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 B3GALNT2Q8NCR0 500 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 LMO3Q8TAP4 145 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 MYCBPAPQ8TBZ2 947 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 SEPT5Q99719 369 aaPredicted RBP13.15□□□□□ -0.3
USP1-203ENST00000442679 INTS2Q9H0H0 1204 aaKnown RBP13.15□□□□□ -0.3
USP1-203ENST00000442679 POMKQ9H5K3 350 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
USP1-203ENST00000442679 TSC2P49815 1807 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 SMTNL1A8MU46 457 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 PES1O00541 588 aaKnown RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 HAPLN1P10915 354 aaPredicted RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 CYP2F1P24903 491 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 ZNF165P49910 485 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 EPHB3P54753 998 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 CYP27A1Q02318 531 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 ORC1Q13415 861 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 CUL2Q13617 745 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 NCAPHQ15003 741 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 GBP6Q6ZN66 633 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 GRASPQ7Z6J2 395 aaPredicted RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 CRYBG2Q8N1P7 616 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 TTC39CQ8N584 583 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 FUBP3Q96I24 572 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP1-203ENST00000442679 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 ARID3AQ99856 593 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 CRACR2AQ9BSW2 395 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 PHF7Q9BWX1 381 aaPredicted RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 NDST4Q9H3R1 872 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 WDR6Q9NNW5 1121 aaKnown RBP13.14□□□□□ -0.31
USP1-203ENST00000442679 ABCB6Q9NP58 842 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 CISHQ9NSE2 258 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 HCFC1R1Q9NWW0 138 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
USP1-203ENST00000442679 CILPO75339 1184 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 PTPN2P17706 415 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
USP1-203ENST00000442679 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
USP1-203ENST00000442679 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
USP1-203ENST00000442679 NTHL1P78549 312 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 KRT31Q15323 416 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 CFAP221Q4G0U5 840 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 MIIPQ5JXC2 388 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 IQCEQ6IPM2 695 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 RRAGAQ7L523 313 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 ADHFE1Q8IWW8 467 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 DHX40Q8IX18 779 aaKnown RBP13.13□□□□□ -0.31
USP1-203ENST00000442679 PPM1KQ8N3J5 372 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 FAM200AQ8TCP9 573 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 ADAMTS19Q8TE59 1207 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 PCED1BQ96HM7 432 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 RPGRIP1Q96KN7 1286 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 TWNKQ96RR1 684 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms