RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ODF2Q5BJF6 829 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 TNFAIP8L3Q5GJ75 292 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 MARCH8Q5T0T0 291 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 OVOS1Q6IE37 1185 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 C16orf59Q7L2K0 433 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 GET4Q7L5D6 327 aaPredicted RBP7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 UBE2Q1Q7Z7E8 422 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 COLGALT1Q8NBJ5 622 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 LMO3Q8TAP4 145 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 MRPL38Q96DV4 380 aaKnown RBP7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 HES6Q96HZ4 224 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 CDT1Q9H211 546 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 NCANO14594 1321 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 IGKV6D-21A0A0A0MT36 114 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 A0A0A6YYK5 440 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 A8MXQ7 604 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 TP73O15350 636 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 RPL17P18621 184 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 EPHB3P54753 998 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 WDR72Q3MJ13 1102 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZPBP2Q6X784 338 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ANKS3Q6ZW76 656 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 SPIRE2Q8WWL2 714 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 UHRF1Q96T88 793 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 NUCKS1Q9H1E3 243 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 RASSF4Q9H2L5 321 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ELAC1Q9H777 363 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 UBE2ZQ9H832 354 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CD207Q9UJ71 328 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 OTOFQ9HC10 1997 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 RAD51CO43502 376 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CXCL10P02778 98 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 PAEPP09466 180 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 PDGFRBP09619 1106 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CD58P19256 250 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ARL2P36404 184 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 MAGEA1P43355 309 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 BRCC3P46736 316 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC11A1P49279 550 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 MBTPS1Q14703 1052 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 AMHR2Q16671 573 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 PDE12Q6L8Q7 609 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 DCLRE1AQ6PJP8 1040 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 GBP6Q6ZN66 633 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 PDZD4Q76G19 769 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 FRMD5Q7Z6J6 570 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 FAM186BQ8IYM0 893 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 RSPH1Q8WYR4 309 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 RNF39Q9H2S5 420 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 NRDE2Q9H7Z3 1164 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 MINDY3Q9H8M7 445 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 DMAC2Q9NW81 257 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNHIT6Q9NWK9 470 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ARMCX3Q9UH62 379 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 GGA2Q9UJY4 613 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CEP83Q9Y592 693 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CYB561D2O14569 222 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 DGKIO75912 1065 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 AKAP3O75969 853 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 IL18RAPO95256 599 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 WEE2P0C1S8 567 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 HOXD8P13378 290 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 SCP2P22307 547 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 PCSK1P29120 753 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 GRIK1P39086 918 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ERVK-21P61565 698 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 YWHAEP62258 255 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF699Q32M78 642 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CACNA2D4Q7Z3S7 1137 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 C12orf76Q8N812 135 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 LNX1Q8TBB1 728 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.83□□□□□ -1.162e-6■■■■■ 54.4
CDC42BPA-208ENST00000442054 RNF34Q969K3 372 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC35C1Q96A29 364 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CORO1BQ9BR76 489 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 ISCUQ9H1K1 167 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 DPP3Q9NY33 737 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 WRAP73Q9P2S5 460 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 CDY1Q9Y6F8 540 aa7.83□□□□□ -1.16
CDC42BPA-208ENST00000442054 GTPBP10A4D1E9 387 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 KRT14P02533 472 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ITGB3P05106 788 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 GALTP07902 379 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 POLR2BP30876 1174 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 FLT3P36888 993 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ARID5AQ03989 594 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 YTHDF3Q7Z739 585 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 RPAINQ86UA6 219 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 KREMEN2Q8NCW0 462 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 FLCNQ8NFG4 579 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 MRPS31Q92665 395 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 TMEM134Q9H6X4 195 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 TMBIM4Q9HC24 238 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 NAGPAQ9UK23 515 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 BARX2Q9UMQ3 279 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms