RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 ARMCX6Q7L4S7 300 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 KRT25Q7Z3Z0 450 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 YTHDF3Q7Z739 585 aaKnown RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 TMTC2Q8N394 836 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 SMG8Q8ND04 991 aaKnown RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 ACDQ96AP0 544 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 ZNF512Q96ME7 567 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 ZSWIM3Q96MP5 696 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 FCRL3Q96P31 734 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 PANX2Q96RD6 677 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 JPH2Q9BR39 696 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 NAA15Q9BXJ9 866 aaKnown RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 HSD3B7Q9H2F3 369 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 FAM204AQ9H8W3 233 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 TRPV4Q9HBA0 871 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 DISC1Q9NRI5 854 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 GTSE1Q9NYZ3 720 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 MYO1AQ9UBC5 1043 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 MBD1Q9UIS9 605 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 GIT1Q9Y2X7 761 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 CDY1Q9Y6F8 540 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 TAF6LQ9Y6J9 622 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 ARID2Q68CP9 1835 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 HECTD1Q9ULT8 2610 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 APC2O95996 2303 aa6.96□□□□□ -1.29
HDAC6-210ENST00000441703 MYO18BQ8IUG5 2567 aa6.96□□□□□ -1.29
HDAC6-210ENST00000441703 FAM237AA0A1B0GTK4 181 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 ARHGEF37A1IGU5 675 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 TARSL2A2RTX5 802 aaKnown RBP6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CTAGE15A4D2H0 777 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 ANKRD33BA6NCL7 494 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 KIF5CO60282 957 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 KIF4AO95239 1232 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CTAGE8P0CG41 777 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 GCFC2P16383 781 aaKnown RBP6.96□□□□□ -1.3
HDAC6-210ENST00000441703 GJA1P17302 382 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 RXRAP19793 462 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CMA1P23946 247 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 SFNP31947 248 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CCR2P41597 374 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 IRAK1P51617 712 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 JAK3P52333 1124 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 MYL5Q02045 173 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 GFPT1Q06210 699 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-210ENST00000441703 TEAD2Q15562 447 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 UGCGQ16739 394 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 DPCR1Q3MIW9 517 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 NFXL1Q6ZNB6 911 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 LPCAT2Q7L5N7 544 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CTAGE6Q86UF2 777 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 SYT12Q8IV01 421 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CCDC50Q8IVM0 306 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 KSR1Q8IVT5 923 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CTAGE4Q8IX94 777 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 FAM181AQ8N9Y4 354 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 LEMD2Q8NC56 503 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 TSTD1Q8NFU3 115 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CCDC12Q8WUD4 166 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CCDC51Q96ER9 411 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 ZFYVE19Q96K21 471 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 TMEM87BQ96K49 555 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 USP28Q96RU2 1077 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 PNKPQ96T60 521 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 NIFKQ9BYG3 293 aaKnown RBP6.96□□□□□ -1.3
HDAC6-210ENST00000441703 TPSD1Q9BZJ3 242 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 RNF39Q9H2S5 420 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 PRORYQ9H606 182 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 CYP4F11Q9HBI6 524 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 ASAH2Q9NR71 780 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 SNTG2Q9NY99 539 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 MTRRQ9UBK8 725 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 PARP2Q9UGN5 583 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 EBF1Q9UH73 591 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 PCDHA7Q9UN72 937 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 HES2Q9Y543 173 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 FREM2Q5SZK8 3169 aa6.96□□□□□ -1.3
HDAC6-210ENST00000441703 PLXNB3Q9ULL4 1909 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 ZNF462Q96JM2 2506 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 CTAGE9A4FU28 777 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 KLHL33A6NCF5 533 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 TRABD2BA6NFA1 517 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 SMCO2A6NFE2 343 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 CASTOR2A6NHX0 329 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 RRP8O43159 456 aaKnown RBP6.95□□□□□ -1.3
HDAC6-210ENST00000441703 PRC1O43663 620 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 SH3BP5O60239 455 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 MAFO75444 373 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-210ENST00000441703 ZNF202O95125 648 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 SERPINC1P01008 464 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
HDAC6-210ENST00000441703 CCDC175P0C221 793 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 SRGAP2CP0DJJ0 459 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 BCKDHBP21953 392 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 AXLP30530 894 aa6.95□□□□□ -1.3
HDAC6-210ENST00000441703 HOXA11P31270 313 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-210ENST00000441703 CIITAP33076 1130 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms