RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 FAM155BO75949 473 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 RARBP10826 455 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 CDK4P11802 303 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 CIITAP33076 1130 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 AQP5P55064 265 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 PSMD6Q15008 389 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 ODR4Q5SWX8 454 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 TMPRSS6Q8IU80 811 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 RHPN2Q8IUC4 686 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 FAM178BQ8IXR5 827 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 PALM2Q8IXS6 379 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 ICA1LQ8NDH6 482 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 OLIG1Q8TAK6 271 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 PYROXD1Q8WU10 500 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 PI4K2AQ9BTU6 479 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 HEY1Q9Y5J3 304 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 MYH3P11055 1940 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 KDM3AQ9Y4C1 1321 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 ERVV-2B6SEH9 535 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 TBC1D12O60347 775 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 PENKP01210 267 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 PDGFRBP09619 1106 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 RXRBP28702 533 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 SLC12A3P55017 1021 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 MARSP56192 900 aaKnown RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 YWHAGP61981 247 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 FOLH1Q04609 750 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 SFSWAPQ12872 951 aaKnown RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 CMPK2Q5EBM0 449 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 C11orf63Q6NUN7 778 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 KLC3Q6P597 504 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 FBXL19Q6PCT2 694 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 KLHL35Q6PF15 583 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 DPP8Q6V1X1 898 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 C3orf62Q6ZUJ4 267 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 AMIGO2Q86SJ2 522 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 DHDDSQ86SQ9 333 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 CCDC89Q8N998 374 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 GRK7Q8WTQ7 553 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 SCYL1Q96KG9 808 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 SLC4A9Q96Q91 983 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 HAPLN3Q96S86 360 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 MMP19Q99542 508 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 C11orf70Q9BRQ4 267 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 TMEM121Q9BTD3 319 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 LRRC19Q9H756 370 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 IFT122Q9HBG6 1241 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 LGALS13Q9UHV8 139 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 DNPEPQ9ULA0 475 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 RABGAP1Q9Y3P9 1069 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 GOLGB1Q14789 3259 aaKnown RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 I3L4J1 428 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 LSM1O15116 133 aaKnown RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 CFLARO15519 480 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 TOM1L1O75674 476 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 CAPN15O75808 1086 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 CHN2P52757 468 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 MSLNQ13421 630 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 DCTN2Q13561 401 aaKnown RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 ATP1A4Q13733 1029 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 BMPR2Q13873 1038 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 PTK6Q13882 451 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 HIC1Q14526 733 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 MYLK3Q32MK0 819 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 TMEM110Q86TL2 294 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 ZFPM1Q8IX07 1006 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 ZBTB8BQ8NAP8 495 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 PAFAH2Q99487 392 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 EBF4Q9BQW3 602 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 USP29Q9HBJ7 922 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 PSMC3IPQ9P2W1 217 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-214ENST00000441542 INPP5FQ9Y2H2 1132 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 SH3GLB1Q9Y371 365 aa7.89□□□□□ -1.15
HDAC9-214ENST00000441542 COL1A1P02452 1464 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 LAMB4A4D0S4 1761 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 TRAFD1O14545 582 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 GGPS1O95749 300 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 TOP3BO95985 862 aaKnown RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 PROCP04070 461 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 FGRP09769 529 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 PABPC4LP0CB38 370 aaKnown RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 PCP11498 1178 aaKnown RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 IL2RBP14784 551 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 UQCRBP14927 111 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 NCF2P19878 526 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 PPP3CAQ08209 521 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 EML3Q32P44 896 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 ANKDD1AQ495B1 522 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 ERFEQ4G0M1 354 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 ACAD11Q709F0 780 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 NANOGNBQ7Z5D8 188 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 PTAR1Q7Z6K3 402 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 NLRX1Q86UT6 975 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 ZFP28Q8NHY6 868 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
HDAC9-214ENST00000441542 ABHD8Q96I13 439 aa7.88□□□□□ -1.15
HDAC9-214ENST00000441542 TLE6Q9H808 572 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms