RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TCF4P15884 667 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 BGNP21810 368 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 RASA2Q15283 850 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 LIN52Q52LA3 116 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 SESTD1Q86VW0 696 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 OGFOD1Q8N543 542 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 GMCL1Q96IK5 515 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 PAFAH2Q99487 392 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 ECSITQ9BQ95 431 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 C11orf70Q9BRQ4 267 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 LARSQ9P2J5 1176 aaKnown RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 MTO1Q9Y2Z2 717 aaKnown RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 CLUHO75153 1309 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 LRRC36Q1X8D7 754 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 KRT39Q6A163 491 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 STYK1Q6J9G0 422 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 OXNAD1Q96HP4 312 aaPredicted RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 MMADHCQ9H3L0 296 aaPredicted RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 DDX43Q9NXZ2 648 aaKnown RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 COL11A2P13942 1736 aaPredicted RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 CREB3O43889 395 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 RNASEH1O60930 286 aaKnown RBP21.3■■□□□ 1
SHOX2-203ENST00000441443 ARP10275 920 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 EFHC2Q5JST6 749 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 RIPOR1Q6ZS17 1223 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 ACSF2Q96CM8 615 aaPredicted RBP21.3■■□□□ 1
SHOX2-203ENST00000441443 VCX3BQ9H321 246 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 VCX3AQ9NNX9 186 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 A8MXQ7 604 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 CFHP08603 1231 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 PSMC4P43686 418 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 PLCB3Q01970 1234 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 NFX1Q12986 1120 aaKnown RBP21.3■■□□□ 1
SHOX2-203ENST00000441443 SNRNP35Q16560 246 aaKnown RBP21.3■■□□□ 1
SHOX2-203ENST00000441443 NLRX1Q86UT6 975 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 BANPQ8N9N5 519 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 GMCL1P1Q8NEA9 526 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 POMGNT1Q8WZA1 660 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 TMEM121Q9BTD3 319 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 VPS11Q9H270 941 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 C10orf88Q9H8K7 445 aa21.3■■□□□ 1
SHOX2-203ENST00000441443 DNAJC6O75061 913 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 GLRA2P23416 452 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 NSFP46459 744 aaKnown RBP21.29■■□□□ 1
SHOX2-203ENST00000441443 KDSRQ06136 332 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 C3orf62Q6ZUJ4 267 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 KCTD17Q8N5Z5 321 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 RBM15BQ8NDT2 890 aaKnown RBP21.29■■□□□ 1
SHOX2-203ENST00000441443 FAM111AQ96PZ2 611 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 PANX3Q96QZ0 392 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 THTPAQ9BU02 230 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 E5RJQ4 531 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 ATP2A1O14983 1001 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 SLC16A4O15374 487 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 MSS51Q4VC12 460 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 RNASEH2BQ5TBB1 312 aaKnown RBP21.29■■□□□ 1
SHOX2-203ENST00000441443 TREML1Q86YW5 311 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 CCDC110Q8TBZ0 833 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 IWS1Q96ST2 819 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 ZNF577Q9BSK1 485 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 RAB20Q9NX57 234 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 NDE1Q9NXR1 346 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 PPM1HQ9ULR3 514 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 MYPNQ86TC9 1320 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 PSTPIP1O43586 416 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 CCNFP41002 786 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 CDC16Q13042 620 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 KRT72Q14CN4 511 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 CCDC142Q17RM4 750 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 HAUS6Q7Z4H7 955 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 KATNAL2Q8IYT4 538 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 ARHGAP18Q8N392 663 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 ALLCQ8N6M5 410 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.29■■□□□ 1
SHOX2-203ENST00000441443 PYROXD1Q8WU10 500 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 RANBP17Q9H2T7 1088 aaKnown RBP21.29■■□□□ 1
SHOX2-203ENST00000441443 EBF3Q9H4W6 596 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 AVENQ9NQS1 362 aaPredicted RBP21.29■■□□□ 1
SHOX2-203ENST00000441443 HOMER2Q9NSB8 354 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 ZBTB21Q9ULJ3 1066 aa21.29■■□□□ 1
SHOX2-203ENST00000441443 TMEM150BA6NC51 233 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 LPXNO60711 386 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 CDK7P50613 346 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 MORF4L2Q15014 288 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 HIF1AQ16665 826 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 CPXCR1Q8N123 301 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 ARHGAP24Q8N264 748 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 FAM210AQ96ND0 272 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 PHACTR1Q9C0D0 580 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 GPRC5CQ9NQ84 441 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 KCND2Q9NZV8 630 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 DENND3A2RUS2 1198 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 A6NJR5 290 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 SGK1O00141 431 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 ENTPD3O75355 529 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 EAPPQ56P03 285 aaPredicted RBP21.28■■□□□ 1
SHOX2-203ENST00000441443 MFSD7Q6UXD7 560 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 SCUBE1Q8IWY4 988 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 FBXL13Q8NEE6 735 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 EXD1Q8NHP7 514 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms