RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PABPC5Q96DU9 382 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 EFCAB1Q9HAE3 211 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 C17orf75Q9HAS0 396 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CYP39A1Q9NYL5 469 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 LNPEPQ9UIQ6 1025 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ZBTB12Q9Y330 459 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 REREQ9P2R6 1566 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 SERPINB3P29508 390 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CSE1LP55060 971 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 ACTN3Q08043 901 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 RTL3Q8N8U3 475 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 MAP2P11137 1827 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 TM9SF1O15321 606 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 MCAMP43121 646 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 DSG1Q02413 1049 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 TLK2Q86UE8 772 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ANKMY2Q8IV38 441 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ZNF473Q8WTR7 871 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 TRIM63Q969Q1 353 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 TMEM106CQ9BVX2 250 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CLEC4MQ9H2X3 399 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 IGSF9BQ9UPX0 1349 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CPSF1Q10570 1443 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 TRIM49BA6NDI0 452 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 RNASEH1O60930 286 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 PSMC3P17980 439 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 MAGEA10P43363 369 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 CAMK2GQ13555 558 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 CLEC16AQ2KHT3 1053 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 USP17L6PQ6QN14 398 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 RFX8Q6ZV50 586 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 IFNEQ86WN2 208 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 UNC5CLQ8IV45 518 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PPIL6Q8IXY8 311 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 RFWD2Q8NHY2 731 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 IL17RAQ96F46 866 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ZNF333Q96JL9 665 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PPP1R36Q96LQ0 422 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PHACTR1Q9C0D0 580 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 SPRTNQ9H040 489 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 MANSC1Q9H8J5 431 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 COPS7BQ9H9Q2 264 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 PRMT7Q9NVM4 692 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 SPHKAPQ2M3C7 1700 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 THRAP10827 490 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CHN1P15882 459 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 FMO5P49326 533 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 AMPD2Q01433 879 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ALDH6A1Q02252 535 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 CYFIP1Q7L576 1253 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CDK20Q8IZL9 346 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 RIN2Q8WYP3 895 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 SEC16BQ96JE7 1060 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CDK5RAP1Q96SZ6 601 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 THUMPD3Q9BV44 507 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 TMEM8AQ9HCN3 771 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 FAM200BP0CF97 657 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ATP6V1C1P21283 382 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PIK3R1P27986 724 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CHI3L1P36222 383 aaPredicted RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 SLC11A2P49281 568 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 RAD23AP54725 363 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 COG2Q14746 738 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 NAB2Q15742 525 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 C10orf53Q8N6V4 93 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 E2F7Q96AV8 911 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 HIC2Q96JB3 615 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 C7orf25Q9BPX7 421 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PIGUQ9H490 435 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ANTXR1Q9H6X2 564 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.94□□□□□ -1.3
USP46-201ENST00000441222 WWOXQ9NZC7 414 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CCDC189A1A4V9 331 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 SASH1O94885 1247 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 MMP10P09238 476 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 TRIM49P0CI25 452 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 TRIM49CP0CI26 452 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 LSP1P33241 339 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PTGER2P43116 358 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 SPP2Q13103 211 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 ZRANB3Q5FWF4 1079 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 NOTUMQ6P988 496 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 RASGRP2Q7LDG7 609 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 PCMTD2Q9NV79 361 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CRLS1Q9UJA2 301 aa6.94□□□□□ -1.3
USP46-201ENST00000441222 CYP26A1O43174 497 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 WEE2P0C1S8 567 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 CHRM3P20309 590 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
USP46-201ENST00000441222 TAB1Q15750 504 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 GSTA3Q16772 222 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 SGMS1Q86VZ5 419 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 SYN2Q92777 582 aaPredicted RBP6.93□□□□□ -1.3
USP46-201ENST00000441222 TEX13BQ9BXU2 312 aa6.93□□□□□ -1.3
USP46-201ENST00000441222 CD209Q9NNX6 404 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms