RNA–Protein interactions for RNA: ENST00000440089.1

AC105339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC105339.1, Length 1,362 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.1-201ENST00000440089 CSH1P0DML2 217 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 CSH2P0DML3 217 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 CXCL12P48061 93 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 NLRP12P59046 1061 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 RBP5P82980 135 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 MYL7Q01449 175 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 SURF1Q15526 300 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 E2F4Q16254 413 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 TMEM150AQ86TG1 271 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 GPIHBP1Q8IV16 184 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 CMTM8Q8IZV2 173 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 TOP6BLQ8N6T0 577 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 RMDN1Q96DB5 314 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 ZFYVE19Q96K21 471 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 MTMR12Q9C0I1 747 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 PCIF1Q9H4Z3 704 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 PDE11AQ9HCR9 933 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 DDX43Q9NXZ2 648 aaKnown RBP17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 GTSE1Q9NYZ3 720 aa17.73■□□□□ 0.43
AC105339.1-201ENST00000440089 PRPF40AO75400 957 aaKnown RBP17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 PAPSS2O95340 614 aaPredicted RBP17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 F11P03951 625 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 TMEM191BP0C7N4 346 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 AVPR1AP37288 418 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 SOX9P48436 509 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 LHX1P48742 406 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 CDR1P51861 262 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 AMPD3Q01432 767 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 BFSP1Q12934 665 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 GAS6Q14393 721 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 INTS6LQ5JSJ4 861 aaKnown RBP17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 TXNDC11Q6PKC3 985 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 SYNPOQ8N3V7 929 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 ANKRD36BP1Q96IX9 119 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 ZNF396Q96N95 335 aaPredicted RBP17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 PKMYT1Q99640 499 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 TRIM9Q9C026 710 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 KIF9Q9HAQ2 790 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 SNX9Q9Y5X1 595 aa17.72■□□□□ 0.43
AC105339.1-201ENST00000440089 ZNF233A6NK53 670 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 GABRDO14764 452 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 EIF3DO15371 548 aaKnown RBP eCLIP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 YEATS4O95619 227 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 KRT19P08727 400 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 PCSK1P29120 753 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 RPL10AP62906 217 aaKnown RBP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 SATB1Q01826 763 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 MYO1EQ12965 1108 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 PUM1Q14671 1186 aaKnown RBP eCLIP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 ITPRIPL2Q3MIP1 535 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 CFAP221Q4G0U5 840 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 DPH6Q7L8W6 267 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 ADGRF2Q8IZF7 708 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 MRPS31Q92665 395 aaKnown RBP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 TRMT2BQ96GJ1 504 aaKnown RBP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 FUBP3Q96I24 572 aaKnown RBP eCLIP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 KIAA1586Q9HCI6 787 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 UXTQ9UBK9 157 aaPredicted RBP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 R3HCC1Q9Y3T6 440 aaKnown RBP17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 CEP250Q9BV73 2442 aa17.71■□□□□ 0.43
AC105339.1-201ENST00000440089 KIF26AQ9ULI4 1882 aaPredicted RBP17.71■□□□□ 0.42
AC105339.1-201ENST00000440089 CUTAO60888 179 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 NOL4O94818 638 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 PDIA4P13667 645 aaKnown RBP17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 TNK2Q07912 1038 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 CCINQ13939 588 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 WDR44Q5JSH3 913 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 LIMS2Q7Z4I7 341 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 MON1AQ86VX9 555 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 IQUBQ8NA54 791 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 GLIS3Q8NEA6 775 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 NOC3LQ8WTT2 800 aaKnown RBP17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 MYRFLQ96LU7 910 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 FAM83CQ9BQN1 747 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 SMG9Q9H0W8 520 aaKnown RBP17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 RBM12Q9NTZ6 932 aaKnown RBP17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 TDP1Q9NUW8 608 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 DLL3Q9NYJ7 618 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
AC105339.1-201ENST00000440089 TNNC2P02585 160 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 ACAT1P24752 427 aaKnown RBP17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 CYP2F1P24903 491 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 HOXD13P35453 343 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 GPR15P49685 360 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 ZNF268Q14587 947 aaPredicted RBP17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 DUOXA2Q1HG44 320 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 SCARA3Q6AZY7 606 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 EPM2AIP1Q7L775 607 aaPredicted RBP17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 OSTM1Q86WC4 334 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 CBWD2Q8IUF1 395 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 WDR49Q8IV35 697 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 MAB21L3Q8N8X9 362 aa17.69■□□□□ 0.42
AC105339.1-201ENST00000440089 TTC8Q8TAM2 541 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms