RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 OR5B17Q8NGF7 314 aa15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 DDX27Q96GQ7 796 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 IMPG2Q9BZV3 1241 aa15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 MTMR12Q9C0I1 747 aa15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 IGFLR1Q9H665 355 aa15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 NAGPAQ9UK23 515 aa15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 DERAQ9Y315 318 aa15.52■□□□□ 0.08
TNFRSF1A-204ENST00000440083 MYH10P35580 1976 aa15.52■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SCN1AP35498 2009 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TMEM189-UBE2V1I3L0A0 370 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 FOXN3O00409 490 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 MOCS3O95396 460 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CXCL14O95715 111 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TNNC2P02585 160 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 H2AFZP0C0S5 128 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 RPL17P18621 184 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 GLUD2P49448 558 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 POU5F1Q01860 360 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TDRD10Q5VZ19 366 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PRSS55Q6UWB4 352 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 H2AFVQ71UI9 128 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 MRPL43Q8N983 215 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 C1orf127Q8N9H9 656 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 VN1R2Q8NFZ6 395 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ZNF516Q92618 1163 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 AGPAT1Q99943 283 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CARD6Q9BX69 1037 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NGRNQ9NPE2 291 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DPP3Q9NY33 737 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CDC23Q9UJX2 597 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 INTUQ9ULD6 942 aa15.51■□□□□ 0.07
TNFRSF1A-204ENST00000440083 BTNL10A8MVZ5 291 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DDX3XO00571 662 aaKnown RBP eCLIP15.5■□□□□ 0.073e-9■■□□□ 12.9
TNFRSF1A-204ENST00000440083 SPTLC1O15269 473 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 XPOTO43592 962 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 LILRB3O75022 631 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 C4BPAP04003 597 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 URODP06132 367 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TMEM191BP0C7N4 346 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 KRT5P13647 590 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TKTP29401 623 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 POLR2BP30876 1174 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PDE6CP51160 858 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 GCNT1Q02742 428 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 WHAMMP3Q1A5X7 153 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 KIAA0319Q5VV43 1072 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CEP112Q8N8E3 955 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 LNX1Q8TBB1 728 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 RIN2Q8WYP3 895 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SHC3Q92529 594 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 KAT5Q92993 513 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ANKRD36BP1Q96IX9 119 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 KREMEN1Q96MU8 473 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TSPAN18Q96SJ8 248 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PI4K2AQ9BTU6 479 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TLE6Q9H808 572 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CHST7Q9NS84 486 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SIX4Q9UIU6 781 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NUB1Q9Y5A7 615 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 COL6A3P12111 3177 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 EYSQ5T1H1 3165 aa15.5■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PIRO00625 290 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CLASP2O75122 1294 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ITGB3P05106 788 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 FGFR3P22607 806 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TBXAS1P24557 533 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DSG1Q02413 1049 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CKAP4Q07065 602 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NCOA4Q13772 614 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DUSP6Q16828 381 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DUOXA2Q1HG44 320 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 USP41Q3LFD5 358 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PDE12Q6L8Q7 609 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 KIAA1841Q6NSI8 718 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 LLGL2Q6P1M3 1020 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 GLYCTKQ8IVS8 523 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 FAM71AQ8IYT1 594 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CXorf38Q8TB03 319 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TTPALQ9BTX7 342 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 MRPL17Q9NRX2 175 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 JRKLQ9Y4A0 524 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CAPN6Q9Y6Q1 641 aa15.49■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SPTBN5Q9NRC6 3674 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ADAM12O43184 909 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 BUB1O43683 1085 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 GLP2RO95838 553 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ATP1A1P05023 1023 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CNPP09543 421 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NOP2P46087 812 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NOP14P78316 857 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DLX2Q07687 328 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TRPC3Q13507 836 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NT5DC4Q86YG4 428 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TATDN2Q93075 761 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SUSD3Q96L08 255 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms