RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PGLYRP2Q96PD5 576 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SYT11Q9BT88 431 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MSTO1Q9BUK6 570 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 ISCUQ9H1K1 167 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 TLR9Q9NR96 1032 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 COL4A6Q14031 1691 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 H3BNC9 293 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ENC1O14682 589 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RNF40O75150 1001 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RFPL2O75678 378 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 KIF4AO95239 1232 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GALTP07902 379 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PLEKP08567 350 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PLS3P13797 630 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 SOX5P35711 763 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 HSPA9P38646 679 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 NAMPTP43490 491 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 DRG2P55039 364 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TFAMQ00059 246 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GFPT1Q06210 699 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 DSC3Q14574 896 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ZSCAN26Q16670 478 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 CFAP58Q5T655 872 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FAM171A1Q5VUB5 890 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RPAINQ86UA6 219 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ARFGAP2Q8N6H7 521 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM161BQ8NDZ6 487 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FAM76AQ8TAV0 307 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RIN2Q8WYP3 895 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 KIF12Q96FN5 646 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ZMAT2Q96NC0 199 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 POP1Q99575 1024 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 COL25A1Q9BXS0 654 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GPR62Q9BZJ7 368 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM117Q9H0C3 514 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 CDT1Q9H211 546 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 CARD9Q9H257 536 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 CWH43Q9H720 699 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PRMT7Q9NVM4 692 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 VPS18Q9P253 973 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 EXOC7Q9UPT5 735 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PPME1Q9Y570 386 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 DMXL1Q9Y485 3027 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TANC1Q9C0D5 1861 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 A0A087X0T9 212 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 A0A1B0GUA9 196 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FAM86C2PA6NEL3 165 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FAM187AA6NFU0 413 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 HMGB1P1B2RPK0 211 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PGRMC1O00264 195 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ACKR2O00590 384 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ASAP2O43150 1006 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TGFB1I1O43294 461 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PALMO75781 387 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 THP07101 528 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 OR4Q2P0C623 313 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FAM228BP0C875 321 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GZMAP12544 262 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 EPCAMP16422 314 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FMO5P49326 533 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 YARSP54577 528 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 SOX4Q06945 474 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 BIRC3Q13489 604 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PTPROQ16827 1216 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ALKBH5Q6P6C2 394 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ENOSF1Q7L5Y1 443 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 MAATS1Q7Z4T9 603 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TPCN2Q8NHX9 752 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 CCDC26Q8TAB7 109 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF689Q96CS4 500 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PGBD4Q96DM1 585 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 HES6Q96HZ4 224 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ACCSQ96QU6 501 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FIZ1Q96SL8 496 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RUFY1Q96T51 708 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ARID3AQ99856 593 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 CBWD1Q9BRT8 395 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 MRPL4Q9BYD3 311 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 HAPLN2Q9GZV7 340 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 EPC1Q9H2F5 836 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 AAASQ9NRG9 546 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 FAM114A2Q9NRY5 505 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 C1orf112Q9NSG2 853 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 SPG21Q9NZD8 308 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 THEGQ9P2T0 379 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TUBGCP4Q9UGJ1 667 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RAPGEFL1Q9UHV5 662 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 DCHS1Q96JQ0 3298 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ANKRD62A6NC57 917 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 F8VZ95 297 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PPEF2O14830 753 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 POLR3GO15318 223 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 SART1O43290 800 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 AKAP3O75969 853 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 LINC00271P0C7V0 271 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 KRT13P13646 458 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 KCNA4P22459 653 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TNNT3P45378 269 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms