RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 TRIP13Q15645 432 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-205ENST00000439958 SOWAHAQ2M3V2 549 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 WDTC1Q8N5D0 677 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 PLVAPQ9BX97 442 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 SENP6Q9GZR1 1112 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-205ENST00000439958 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 STXBP5LQ9Y2K9 1186 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 LRRD1A4D1F6 860 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 E5RJQ4 531 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 CARSP49589 748 aaKnown RBP15.92■□□□□ 0.14
CPSF7-205ENST00000439958 CLCNKBP51801 687 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 PLCB3Q01970 1234 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 RNASELQ05823 741 aaKnown RBP15.92■□□□□ 0.14
CPSF7-205ENST00000439958 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 WSCD1Q658N2 575 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 SCUBE3Q8IX30 993 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 ADGRF2Q8IZF7 708 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 FAM149B1Q96BN6 582 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 CARD9Q9H257 536 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 CYP3A43Q9HB55 503 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 ERVK-5Q9HDB9 667 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 CCDC66A2RUB6 948 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 TAS2R40P59535 323 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 TUBB4BP68371 445 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
CPSF7-205ENST00000439958 ARHGEF6Q15052 776 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 MTFR1Q15390 333 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 JOSD2Q8TAC2 188 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 NAP1L3Q99457 506 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-205ENST00000439958 B3GNT5Q9BYG0 378 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 TSPYL2Q9H2G4 693 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-205ENST00000439958 NGRNQ9NPE2 291 aaKnown RBP15.92■□□□□ 0.14
CPSF7-205ENST00000439958 MTUS1Q9ULD2 1270 aa15.92■□□□□ 0.14
CPSF7-205ENST00000439958 ARL5CA6NH57 179 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 CLDN5O00501 218 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 MGEA5O60502 916 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 KRT1P04264 644 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 ERBB2P04626 1255 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 VDRP11473 427 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 UNC93B1Q9H1C4 597 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 CNTN3Q9P232 1028 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 L1RE1Q9UN81 338 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 PTGESO14684 152 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 KRT10P13645 584 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 MAP2K2P36507 400 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 PDCLQ13371 301 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 PHF13Q86YI8 300 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-205ENST00000439958 IFT20Q8IY31 132 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 MMGT1Q8N4V1 131 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 TAB3Q8N5C8 712 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-205ENST00000439958 SLC2A14Q8TDB8 520 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 HSPH1Q92598 858 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-205ENST00000439958 A0A1W2PQ45 241 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-205ENST00000439958 A0A1W2PQY0 241 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 PROSCO94903 275 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 BCAR1P56945 870 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 LILRA4P59901 499 aa15.91■□□□□ 0.14
CPSF7-205ENST00000439958 SASH3O75995 380 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 LSM8O95777 96 aaKnown RBP15.9■□□□□ 0.14
CPSF7-205ENST00000439958 PAEPP09466 180 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 MCM3P25205 808 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 CTNNA2P26232 953 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 LPIN1Q14693 890 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 PPP1R7Q15435 360 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 TAF5Q15542 800 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 SV2CQ496J9 727 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 NT5DC4Q86YG4 428 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 CCDC26Q8TAB7 109 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 ACTRT1Q8TDG2 376 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 PPP1R12CQ9BZL4 782 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 UPF3AQ9H1J1 476 aaKnown RBP15.9■□□□□ 0.14
CPSF7-205ENST00000439958 CENPHQ9H3R5 247 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 IP6K2Q9UHH9 426 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.9■□□□□ 0.14
CPSF7-205ENST00000439958 CNTN6Q9UQ52 1028 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 ZRANB2O95218 330 aaKnown RBP eCLIP15.9■□□□□ 0.14
CPSF7-205ENST00000439958 RALAP11233 206 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 KLHDC9Q8NEP7 349 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 CXorf38Q8TB03 319 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 PIWIL1Q96J94 861 aaKnown RBP15.9■□□□□ 0.14
CPSF7-205ENST00000439958 RSAD1Q9HA92 442 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 AVENQ9NQS1 362 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-205ENST00000439958 FGFR1P11362 822 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 PCBP1Q15365 356 aaKnown RBP eCLIP15.9■□□□□ 0.141e-15■■■■■ 80.2
CPSF7-205ENST00000439958 UBR7Q8N806 425 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 CALN1Q9BXU9 219 aa15.9■□□□□ 0.14
CPSF7-205ENST00000439958 DAPK3O43293 454 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 DR1Q01658 176 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 CASP8Q14790 479 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 FAM182AQ5T1J6 154 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 GSTA5Q7RTV2 222 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 HDXQ7Z353 690 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 RHOT1Q8IXI2 618 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 NDRG1Q92597 394 aaKnown RBP15.89■□□□□ 0.13
CPSF7-205ENST00000439958 STRIP2Q9ULQ0 834 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 UTP11Q9Y3A2 253 aaKnown RBP15.89■□□□□ 0.13
CPSF7-205ENST00000439958 CETN2P41208 172 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 OGDHQ02218 1023 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms