RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TMC7Q7Z402 723 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF438Q7Z4V0 828 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 SERINC5Q86VE9 423 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARHGEF19Q8IW93 802 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 GJD3Q8N144 294 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 GOLGA6L1Q8N7Z2 621 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 TTC16Q8NEE8 873 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 KLHDC9Q8NEP7 349 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 DNAJB3Q8WWF6 145 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 SEMA4DQ92854 862 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 SECISBP2LQ93073 1101 aaKnown RBP4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZBTB10Q96DT7 871 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOX5Q96PH1 765 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 ALS2CR12Q96Q35 445 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRIM6Q9C030 488 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 GTF2IRD1Q9UHL9 959 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 FOXD3Q9UJU5 478 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 NAGPAQ9UK23 515 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 GUCA1BQ9UMX6 200 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 CNTN6Q9UQ52 1028 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 REXO2Q9Y3B8 237 aaKnown RBP4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 C2CD2Q9Y426 696 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCDHB2Q9Y5E7 798 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRPV2Q9Y5S1 764 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 SQORQ9Y6N5 450 aa4.25□□□□□ -1.73
HMGB1P37-201ENST00000439613 PDCD11Q14690 1871 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A087X0T9 212 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A0A6YYK5 440 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 MYADML2A6NDP7 307 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF263O14978 683 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CYP26A1O43174 497 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 RTN2O75298 545 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 LRRN2O75325 713 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CSDE1O75534 798 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPS6KA5O75582 802 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CLSTN1O94985 981 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 VNN1O95497 513 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NPTXRO95502 500 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CD4P01730 458 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM228BP0C875 321 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CXCL8P10145 99 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 RARAP10276 462 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 KCNE1P15382 129 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 PRLRP16471 622 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZSCAN20P17040 1043 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ATF7P17544 494 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 TNFSF9P41273 254 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 RAB27AP51159 221 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 PDE6CP51160 858 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ACLYP53396 1101 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NAP1L1P55209 391 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 OSTNP61366 133 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOP14P78316 857 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CDR2Q01850 454 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 MLLT1Q03111 559 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 TMEM62Q0P6H9 643 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 MYO1EQ12965 1108 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ORC1Q13415 861 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CUL2Q13617 745 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ITGA7Q13683 1181 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 TCEAL1Q15170 157 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 PTGISQ16647 500 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF699Q32M78 642 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC10A6Q3KNW5 377 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 SEZ6Q53EL9 994 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM47CQ5HY64 1035 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF667Q5HYK9 610 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CCSAPQ6IQ19 270 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 GDF6Q6KF10 455 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ALKBH5Q6P6C2 394 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 SYCE1Q8N0S2 351 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC35F6Q8N357 371 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 USP38Q8NB14 1042 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZSCAN1Q8NBB4 408 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 GALNT6Q8NCL4 622 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 MNS1Q8NEH6 495 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 MYRIPQ8NFW9 859 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 OR5B17Q8NGF7 314 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC30A5Q8TAD4 765 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 WHAMMQ8TF30 809 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 U2AF1L4Q8WU68 220 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF296Q8WUU4 475 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 EDARADDQ8WWZ3 215 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CTNNBL1Q8WYA6 563 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRIM11Q96F44 468 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CPB2Q96IY4 423 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF668Q96K58 619 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 GLT1D1Q96MS3 346 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 KREMEN1Q96MU8 473 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 WDR24Q96S15 920 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 PPP1R16BQ96T49 567 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 OSMRQ99650 979 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NAPGQ99747 312 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 SYT11Q9BT88 431 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 GPR88Q9GZN0 384 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NIF3L1Q9GZT8 377 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ISCUQ9H1K1 167 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 L2HGDHQ9H9P8 463 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 CYP3A43Q9HB55 503 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms