RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 A0A1W2PRU2 124 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 ZNF233A6NK53 670 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 SHISA7A6NL88 538 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
IRF1-204ENST00000439555 TM4SF5O14894 197 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 HUS1O60921 280 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 F13A1P00488 732 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 ITGB3P05106 788 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 HAPLN1P10915 354 aaPredicted RBP12.34□□□□□ -0.43
IRF1-204ENST00000439555 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
IRF1-204ENST00000439555 CCR3P51677 355 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 WNT7BP56706 349 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 EHHADHQ08426 723 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 FCHO2Q0JRZ9 810 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 MGAT5BQ3V5L5 792 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 VITQ6UXI7 678 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 TPRG1Q6ZUI0 275 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 GAREM2Q75VX8 874 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 DPH6Q7L8W6 267 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 LRRTM3Q86VH5 581 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 CSGALNACT2Q8N6G5 542 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 LEO1Q8WVC0 666 aaPredicted RBP12.34□□□□□ -0.43
IRF1-204ENST00000439555 DHX58Q96C10 678 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 PDE11AQ9HCR9 933 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 ZNF334Q9HCZ1 680 aaPredicted RBP12.34□□□□□ -0.43
IRF1-204ENST00000439555 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 CGNQ9P2M7 1197 aaKnown RBP12.34□□□□□ -0.43
IRF1-204ENST00000439555 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 ATRXP46100 2492 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 HEPACAM2A8MVW5 462 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ARNTLO00327 626 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 GABRDO14764 452 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ZNF263O14978 683 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 CHADO15335 359 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 POLR2DO15514 142 aaKnown RBP12.33□□□□□ -0.44
IRF1-204ENST00000439555 FAM163BP0C2L3 166 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 GJA1P17302 382 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 CDC25CP30307 473 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 GDI1P31150 447 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 HOXD13P35453 343 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 VIPR2P41587 438 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 LHX1P48742 406 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ASIC1P78348 528 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 TSPY1Q01534 308 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 UNC13DQ70J99 1090 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 LIMS2Q7Z4I7 341 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
IRF1-204ENST00000439555 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 TOP6BLQ8N6T0 577 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ZSWIM2Q8NEG5 633 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ANKRD36BP1Q96IX9 119 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 SEPT5Q99719 369 aaPredicted RBP12.33□□□□□ -0.44
IRF1-204ENST00000439555 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 ATXN3LQ9H3M9 355 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 PCIF1Q9H4Z3 704 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 TASP1Q9H6P5 420 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 PCDHA7Q9UN72 937 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
IRF1-204ENST00000439555 PCDHB5Q9Y5E4 795 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 UBE4BO95155 1302 aa12.33□□□□□ -0.44
IRF1-204ENST00000439555 GOLGA8IPA6NC78 632 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 GOLGA8JA6NMD2 632 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 TGFB1I1O43294 461 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
IRF1-204ENST00000439555 PAPSS2O95340 614 aaPredicted RBP12.32□□□□□ -0.44
IRF1-204ENST00000439555 PROS1P07225 676 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 TMEM191BP0C7N4 346 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 ATF6P18850 670 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 GABRR2P28476 465 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 PCSK1P29120 753 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 ME1P48163 572 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 MYL7Q01449 175 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 MYO1EQ12965 1108 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 COL9A2Q14055 689 aaPredicted RBP12.32□□□□□ -0.44
IRF1-204ENST00000439555 GRM2Q14416 872 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 BMT2Q1RMZ1 405 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 RESP18Q5W5W9 173 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 WDR49Q8IV35 697 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 C12orf56Q8IXR9 622 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 GLIS3Q8NEA6 775 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 AGPAT3Q9NRZ7 376 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 HSPBP1Q9NZL4 362 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 MYH11P35749 1972 aa12.32□□□□□ -0.44
IRF1-204ENST00000439555 SOAT2O75908 522 aa12.31□□□□□ -0.44
IRF1-204ENST00000439555 TNNC2P02585 160 aa12.31□□□□□ -0.44
IRF1-204ENST00000439555 CSH1P0DML2 217 aa12.31□□□□□ -0.44
IRF1-204ENST00000439555 CSH2P0DML3 217 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms