RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RNF149Q8NC42 400 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF280CQ8ND82 737 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 OR5B17Q8NGF7 314 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SEC14L1Q92503 715 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 EPAS1Q99814 870 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMEM8AQ9HCN3 771 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF302Q9NR11 478 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 CYP26B1Q9NR63 512 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARHGEF3Q9NR81 526 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 GGA3Q9NZ52 723 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 STXBP5LQ9Y2K9 1186 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 NUDT17P0C025 328 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 TROVE2P10155 538 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 BGNP21810 368 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 RPS6KA3P51812 740 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 COG7P83436 770 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 POU5F1Q01860 360 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 CYP24A1Q07973 514 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 DPY19L2P1Q6NXN4 242 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 CRELD2Q6UXH1 353 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLC26A7Q8TE54 656 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 CFAP36Q96G28 342 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 CALN1Q9BXU9 219 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 GGA2Q9UJY4 613 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 CNTNAP1P78357 1384 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 LAMB2P55268 1798 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 FAM237BA0A1B0GVD1 139 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 A6NJR5 290 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 TCF4P15884 667 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 TNFSF9P41273 254 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 PTGER2P43116 358 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 RAP1GAPP47736 663 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 IL31Q6EBC2 164 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 RSPH3Q86UC2 560 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 PALM2Q8IXS6 379 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 RNF148Q8N7C7 305 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 RBBP8NLQ8NC74 664 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 FBXO27Q8NI29 283 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 ACAP3Q96P50 834 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 MCEEQ96PE7 176 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 MTMR12Q9C0I1 747 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 AAASQ9NRG9 546 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 UBIAD1Q9Y5Z9 338 aa10.44□□□□□ -0.74
CDC42SE1-202ENST00000439374 CDH16O75309 829 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 TBX10O75333 385 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMEM191BP0C7N4 346 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 GTF2H1P32780 548 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 WNT7BP56706 349 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 RPL7AP62424 266 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 CUL3Q13618 768 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 TFDP1Q14186 410 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ACSBG2Q5FVE4 666 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 C1orf220Q5T0J3 134 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF772Q68DY9 489 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ACAD10Q6JQN1 1059 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 MOB2Q70IA6 237 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 OTOAQ7RTW8 1153 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 RASGEF1CQ8N431 466 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 EMC1Q8N766 993 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 C1orf131Q8NDD1 294 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 C7orf43Q8WVR3 580 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 MRIQ9BWK5 157 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 UBE2OQ9C0C9 1292 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 WNT8AQ9H1J5 351 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 STOML1Q9UBI4 398 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 GRID1Q9ULK0 1009 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 NEU2Q9Y3R4 380 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 GSTT1P30711 240 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARFIP2P53365 341 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 CDH8P55286 799 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 BACE1P56817 501 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 NCOA4Q13772 614 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 BMPR2Q13873 1038 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 MTFR1Q15390 333 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 LY6KQ17RY6 165 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 GJC2Q5T442 439 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 CEP128Q6ZU80 1094 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 CEP120Q8N960 986 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 LMO3Q8TAP4 145 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 HSPH1Q92598 858 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 EZH1Q92800 747 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 APOL6Q9BWW8 343 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ADAMTSL1Q8N6G6 1762 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 SYNJ2BP-COX16A0A087WUM0 186 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 A0A0A6YYK5 440 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 HNRNPRO43390 633 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 OR6B1O95007 311 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 SOX11P35716 441 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMEM132BQ14DG7 1078 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAPK6Q16659 721 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 DNAJC24Q6P3W2 148 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 SPATA24Q86W54 205 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 C4orf19Q8IY42 314 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 FAM71AQ8IYT1 594 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 NETO2Q8NC67 525 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ASAP3Q8TDY4 903 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms